Gene Information

Name : BJ6T_49260 (BJ6T_49260)
Accession : YP_005609776.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5006777 - 5008294 bp
Length : 1518 bp
Strand : +
Note : -

DNA sequence :
ATGAACAAGGTGGAATTCCTCGGCGTCACCCAGGTTCCCTTTGCCGAACGCTATGACAATTTCATCGGCGGCAAATTCAT
CGCGCCAATCTCCGGCAAGTACTTTGACAACGCCTCGCCGGTGAACGGCCAGATCGTCTGCAAGATCGCGCGTTCCGATG
CGCAGGACGTCGAGGCCGCCCTCGATGCGGCGCACGCCGCCAAGGGCGCCTGGGGACGCACCAGCGTCGCCGAGCGCGCC
GCGATCCTGAACCGGATCGCCGACCGGATGGAAGAGAATCTGGAGCGCCTTGCGATTGCCGAAACCTGGGACAACGGCAA
GCCGATCCGCGAGACCCGCGCCGCCGACCTGCCACTCGCGATCGATCATTTCCGCTATTTCGCCGGCGTGGTGCGCGCAC
AGGAGGGCTCGATCGGCGAGATCGACCACGACACCATCGCCTATCATTTCCACGAACCGCTCGGCGTGGTCGGCCAGATC
ATCCCCTGGAACTTCCCGCTGCTGATGGCGTGCTGGAAGCTCGCGCCGGCGCTCGCCGCCGGCAATTGCGTCGTGCTCAA
GCCCGCTGAGCAGACGCCGGCCTCGATCATGGTCTGGGCCGAGATCATCGGCGATCTCCTGCCGCCCGGCGTCCTCAACA
TCGTCAACGGCTTTGGCCTCGAAGCCGGCAAGCCGCTCGCGTCCAGCCCGCGGATCGCGAAAATCGCCTTCACCGGCGAG
ACCACGACGGGCCGGCTGATAATGCAATATGCCAGCCAGAACCTGATCCCGGTCACGCTCGAGCTCGGCGGCAAGTCGCC
GAACATCTTCTTCAACGACGTCACCGCCGAGGACGACGACTTCTTCGACAAGGCGATCGAAGGTTTTGTGATGTTCGCGC
TGAACCAGGGCGAGGTCTGCACCTGTCCGAGCCGGGCGCTGGTCCACGCCGACATCTATGACCGCTTCATGGAGCGTGCG
CTGAAGCGCGTCGCCGCGATCAAGCAGGGCGACCCGCGCGCGGCCGACACCATGATCGGCGCGCAGGCATCCAGCGAGCA
GCTCGCCAAGATCCTCTCCTATATCGACATCGGCAAGCAGGAGGGCGCCAAGGTGCTGGCCGGCGGCGGTCGTGCCGAGC
TCGGCGGCGATCTGTCCGGCGGCTTCTATGTCCAGCCGACGGTGTTCGAGGGCCACAACAAGATGCGAATCTTCCAGGAG
GAGATCTTTGGTCCGGTCGTCTCGGTCACGACCTTCAAGACCGATGACGAAGCGCTCGCGATCGCCAACGACACGCTCTA
CGGCCTGGGAGCCGGCGTCTGGAGTCGCGATGCCAACCGCTGCTACCGCTTCGGCCGGGCCATCCAGGCCGGCCGGGTCT
GGACCAACTGCTATCATGCGTATCCTGCGCATGCCGCGTTCGGCGGTTACAAGCAGTCGGGCGTCGGTCGCGAGACCCAC
AAGATGATGCTCGATCATTACCAGCAGACCAAGAATCTCCTGGTCAGCTACAGCCCGAAGAAGCTTGGCTTCTTCTGA

Protein sequence :
MNKVEFLGVTQVPFAERYDNFIGGKFIAPISGKYFDNASPVNGQIVCKIARSDAQDVEAALDAAHAAKGAWGRTSVAERA
AILNRIADRMEENLERLAIAETWDNGKPIRETRAADLPLAIDHFRYFAGVVRAQEGSIGEIDHDTIAYHFHEPLGVVGQI
IPWNFPLLMACWKLAPALAAGNCVVLKPAEQTPASIMVWAEIIGDLLPPGVLNIVNGFGLEAGKPLASSPRIAKIAFTGE
TTTGRLIMQYASQNLIPVTLELGGKSPNIFFNDVTAEDDDFFDKAIEGFVMFALNQGEVCTCPSRALVHADIYDRFMERA
LKRVAAIKQGDPRAADTMIGAQASSEQLAKILSYIDIGKQEGAKVLAGGGRAELGGDLSGGFYVQPTVFEGHNKMRIFQE
EIFGPVVSVTTFKTDDEALAIANDTLYGLGAGVWSRDANRCYRFGRAIQAGRVWTNCYHAYPAHAAFGGYKQSGVGRETH
KMMLDHYQQTKNLLVSYSPKKLGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-144 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 7e-149 63
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 7e-149 63
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 7e-149 63
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-148 63
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 6e-67 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_49260 YP_005609776.1 aldehyde dehydrogenase VFG0082 Protein 8e-145 64