Gene Information

Name : BJ6T_47380 (BJ6T_47380)
Accession : YP_005609591.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4811066 - 4812475 bp
Length : 1410 bp
Strand : -
Note : -

DNA sequence :
ATGAAGACCGCCAAAGACGTCCTGAAATCGATCAAGGACAACGACGTCAAATACGTCGACCTGCGCTTCACCGATCCGCG
CGGCAAGTGGCAGCACGTGACGTTCGACGTCAGCATGATCGATGAGGACATTTTCGCCGAAGGGACGATGTTCGACGGCT
CCTCGATCGCCGGCTGGAAGGCGATCAACGAGTCCGACATGTGCCTGATGCCGGATCCGGTGACCGCGACGATCGACCCG
TTCTTCGCCGAAACCACCATGGTCATCACCTGCGACGTGCTCGAGCCGACCACCGGCGAGCCCTACAACCGCGACCCCCG
CGGCATCGCCAAGAAGGCCGAGGCCATGGTGAAGTCGATGGGCGTGGGCGACAGCGTGTTCGTCGGCCCCGAGGCCGAGT
TCTTCGTGTTCGACGACGTGCGCTTCTCGTCCAGCCCCTACAACACCGGTTTCCGGCTCGACTCCTCGGAGCTGCCGACC
AACACCGACACGGAATATGAGGGCGGCAATCTCGGCCACCGGATCCGCACCAAGGCGGGCTACTTCCCCGTCCCGCCGCA
GGACTCGGTTCAGGACATGCGCTCGGAGATGCTGGGCGCCATGGCCAAGATGGGCGTCAAGGTCGAGAAGCATCACCACG
AGGTCGCTTCCGCCCAGCACGAGCTCGGCATGAAGTTCGACACGCTGACGCTGATGGCCGACCATCTGCAGATCTACAAA
TACTGCATCCACCAGGTCGCCCACATCTACGGCAAGACCGCCACCTTCATGCCGAAGCCGGTCTATGGCGATAACGGCTC
GGGCATGCACGTGCACCAGTCGATCTGGAAGGACGGCAAGCCGGTGTTCGCCGGCAACAAATATGCCGACCTGTCGGAGA
CCTGCCTCCACTACATCGGCGGCATCATCAAGCACGCCAAGGCGATCAACGCCTTCACCAACCCGTCGACCAATTCCTAC
AAGCGTCTGGTCCCGGGCTATGAGGCCCCGGTGCTGCTCGCCTACTCCGCGCGCAACCGCTCGGCCTCCTGCCGCATCCC
CTACACCGCTTCGCCGAAGGCCAAGCGCGTCGAGGTGCGCTTCCCCGATCCGCTCGCCAATCCCTATCTCGGCTTCGCCG
CGATGCTGATGGCCGGCCTCGACGGCATCAAGAACAAGATCGATCCGGGTCCGGCGATGGACAAGGACCTCTACGACCTG
CCGAAGGAAGAGCTGAAGCAGATCCCGACGGTGTGCGGCTCGCTCCGCGAGGCGCTCGAAAACCTCGACAAGGACCGCGG
CTTCCTCAAGAACGGCGGCGTGTTCGACGACGACTTCATCGACGCCTATATCGAGCTGAAGATGACCGAAGTCGAGCGCT
TCGAAATGACCCCGCACCCGGTCGAGTTCGACATGTACTATTCGGGCTAA

Protein sequence :
MKTAKDVLKSIKDNDVKYVDLRFTDPRGKWQHVTFDVSMIDEDIFAEGTMFDGSSIAGWKAINESDMCLMPDPVTATIDP
FFAETTMVITCDVLEPTTGEPYNRDPRGIAKKAEAMVKSMGVGDSVFVGPEAEFFVFDDVRFSSSPYNTGFRLDSSELPT
NTDTEYEGGNLGHRIRTKAGYFPVPPQDSVQDMRSEMLGAMAKMGVKVEKHHHEVASAQHELGMKFDTLTLMADHLQIYK
YCIHQVAHIYGKTATFMPKPVYGDNGSGMHVHQSIWKDGKPVFAGNKYADLSETCLHYIGGIIKHAKAINAFTNPSTNSY
KRLVPGYEAPVLLAYSARNRSASCRIPYTASPKAKRVEVRFPDPLANPYLGFAAMLMAGLDGIKNKIDPGPAMDKDLYDL
PKEELKQIPTVCGSLREALENLDKDRGFLKNGGVFDDDFIDAYIELKMTEVERFEMTPHPVEFDMYYSG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 1e-101 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_47380 YP_005609591.1 glutamine synthetase VFG1399 Protein 3e-100 52