Gene Information

Name : BJ6T_41750 (BJ6T_41750)
Accession : YP_005609036.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4293953 - 4294939 bp
Length : 987 bp
Strand : -
Note : -

DNA sequence : 
ATGGCCACTCCCGCCGCTCTCGAACTGGTCGCCGTCACCAAGCGCTACGACACGACGCTGGCCGTCGACACCGTCAATTT
GAAGATCCCGGCCGGGACCTATTGCTGCCTGCTCGGCCCCTCCGGCTGCGGCAAGACCTCGACCTTGCGCATGATCGCGG
GCCATGAGGCGGTCAGCGAAGGCGACATCATCCTCGGCGCGCAGAACGTGACCGACCTCGAGCCGGCCAAGCGCGGCACG
GCGATGATGTTCCAGTCCTACGCGCTGTTTCCGCATCTGACCGTGCTGGACAACGTGGCGTTTGCCCTCAAAATGCGCGG
CGTCGACCGCACGACCAGGCACAAGCGCGCCGGCGAATTGCTGGAGCTGGTGGCGATGACACCCTATGCGGGCCGGCTTC
CGGCCCAACTCTCCGGCGGCCAGCAGCAGCGCGTGGCGCTGGCTCGCGCACTGATCACCGAGCCGCAGATCTTGCTGCTC
GACGAGCCGCTCTCCGCACTCGATCCGTTCCTGCGGGTGAAGATGCGCGGCGAGCTGAAGCGCCTTCAGCGCGAGCTTGG
CATCAGCTTCATCCAGGTCACCCACGGCCAGGAAGAAGCGATGGCGCTCGCCGACCACATCGTGGTGATGAACCAGGGCC
GGATCGAGCAGCAGGGCGCCGCGCGCGACATCTTCCACCACCCCCGCACCGAATTCGTGGCGCGCTTCATCGGTGGCCAC
AACGTCCTCAGCGATGCCGGAAGCCTCATCGCCGTGCGCGCCGATCAGCTCGGCATCGCGCCGTTCACTGACGGCGCGTT
CGGCGCGCCGGCGCTGCTGACCCAGACCGAGTACCAGGGCTCCTACATCGCCGTCTCGCTCACGCTCGACGACGGCACCG
CCCTGTTCTCCCACCTCCCCGAGGCCGCCTTCGACGTCCACCCGTTCCGTCCGGGCGATCGCGTGCTGGCCACCTGGGAT
CCCGCCAAGGCGCAACGCCTGCAATAG

Protein sequence : 
MATPAALELVAVTKRYDTTLAVDTVNLKIPAGTYCCLLGPSGCGKTSTLRMIAGHEAVSEGDIILGAQNVTDLEPAKRGT
AMMFQSYALFPHLTVLDNVAFALKMRGVDRTTRHKRAGELLELVAMTPYAGRLPAQLSGGQQQRVALARALITEPQILLL
DEPLSALDPFLRVKMRGELKRLQRELGISFIQVTHGQEEAMALADHIVVMNQGRIEQQGAARDIFHHPRTEFVARFIGGH
NVLSDAGSLIAVRADQLGIAPFTDGAFGAPALLTQTEYQGSYIAVSLTLDDGTALFSHLPEAAFDVHPFRPGDRVLATWD
PAKAQRLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-36 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_41750 YP_005609036.1 ABC transporter ATP-binding protein BAC0604 Protein 5e-44 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_41750 YP_005609036.1 ABC transporter ATP-binding protein VFG1206 Protein 1e-32 41