Gene Information

Name : BJ6T_38350 (BJ6T_38350)
Accession : YP_005608697.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : dehydrogenase, possibly aldehyde dehydrogenase protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3953942 - 3955390 bp
Length : 1449 bp
Strand : -
Note : -

DNA sequence :
ATGACTGCGATCCTCAAGAACTTCATCGGCGGCGAATGGGTCGACGGCTCCGGCGTCACCAAGAACATCAACCCCTCCAA
CACCAACGATCTGGTCGGCGAATACGCCAAGGCCGACAAGGCGCAGACCGAGAAGGCGATCGCCGCAGCCAAGGCCGCCT
TCCCCGCCTGGGCGCAGTCGACCCCGCAGGTGCGCTACGACGCGCTCAACAAGATCTCGACTGAAATCCTTGCCCGCAAG
GAAGAGCTCGGCCGCCTGCTCGCCCGCGAGGAAGGCAAGACCCTGCCGGAAGGTATCGGCGAGGTCGCCCGCGCCGGCCA
GATCTTTGCGTTCTTTGCAGGTGAAGCGCTGCGCCTGATCGGCGAGAAGGGCGCCTCGGTGCGTCCCGGCCTCGACGTCG
AGCTCACCCGTGAGCCGGTCGGCGTCGTCGGCATGATCACCCCCTGGAATTTCCCGATCGCGATCCCCGCCTGGAAGATC
GCGCCGGCGCTCTGCTACGGCAACACCGTGGTGTTCAAGCCGGCCGAGCTGGTGCCCGGCTCGGCGCATGCGCTGTCGGA
GATCATCACCCGCTCCGGCATTCCCGCCGGCGTGTTCAACCTCGTCGTCGGCTCCGGCTCCGTGGTCGGCCAGACCCTGC
TCGACCACCCGGATGTCGCCGCGATCTCCTTCACCGGCTCGGTGCAGACCGGCCGCAAGATCGCGCAGGCCTGCGTGCTC
TCGAACCCCATGAAGAAGTTCCAGCTCGAGATGGGCGGCAAGAATCCGCTGGTCGTGCTCGACGACGCCGACCTCAAGAC
CGCCGTCGAGGTCGCCGTCAACGGCGCCTATTTCTCGACCGGCCAGCGCTGCACGGCGTCCTCGCGCCTGATCGTCACCG
AAGGCATCCACGACCGCTTCGTTGCGGCGATGGCCGAGCGCCTGAACGGCCTGTCGGTGGACGACGCACTCAAGGCCGGC
GTGCATATCGGCCCCGTGGTCGATCAGAGCCAGCTCGACCAGGACCTGCGCTACATCAAGATCGGCCAGGACGAGGGCGC
CAAGCTCGCCTTCGGCGGCGAGCTGCTCAAGCGCGAGAATCCCGGCCACTATCTCCAGCCGGCGCTGTTCACCGAAGCCA
ACAACAACATGCGCATCGCGCGCGAGGAGATCTTCGGCCCCGTCGCCGCCGTCATCCGCGCCAAGAACTACGAGGAAGCG
CTGGCGATCTCCAACGACACCGAGTTCGGCCTCGCCTCGGGCATCTGCACCACCAGCCTGAAATACGCCTCGCACTACAA
GCGCAACAGCGAGTCCGGCATGGTGATGGTCAATCTGCCGACCGCCGGCGTCGACTATCACGTGCCGTTCGGCGGCCGGA
AGGGTTCGAGCTACGGCGCCCGCGAGCAGGGCTCGTATGCCCGCGAGTTCTACACCACGGTGAAGACGGCCTATACCTAT
CCGGGCTAA

Protein sequence :
MTAILKNFIGGEWVDGSGVTKNINPSNTNDLVGEYAKADKAQTEKAIAAAKAAFPAWAQSTPQVRYDALNKISTEILARK
EELGRLLAREEGKTLPEGIGEVARAGQIFAFFAGEALRLIGEKGASVRPGLDVELTREPVGVVGMITPWNFPIAIPAWKI
APALCYGNTVVFKPAELVPGSAHALSEIITRSGIPAGVFNLVVGSGSVVGQTLLDHPDVAAISFTGSVQTGRKIAQACVL
SNPMKKFQLEMGGKNPLVVLDDADLKTAVEVAVNGAYFSTGQRCTASSRLIVTEGIHDRFVAAMAERLNGLSVDDALKAG
VHIGPVVDQSQLDQDLRYIKIGQDEGAKLAFGGELLKRENPGHYLQPALFTEANNNMRIAREEIFGPVAAVIRAKNYEEA
LAISNDTEFGLASGICTTSLKYASHYKRNSESGMVMVNLPTAGVDYHVPFGGRKGSSYGAREQGSYAREFYTTVKTAYTY
PG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-37 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_38350 YP_005608697.1 dehydrogenase, possibly aldehyde dehydrogenase protein VFG0082 Protein 9e-38 41