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Name : BJ6T_36780 (BJ6T_36780) Accession : YP_005608540.1 Strain : Bradyrhizobium japonicum USDA 6 Genome accession: NC_017249 Putative virulence/resistance : Virulence Product : general secretion pathway protein E Function : - COG functional category : - COG ID : - EC number : - Position : 3768314 - 3770011 bp Length : 1698 bp Strand : + Note : - DNA sequence : GTGAATGCGATGCGCGACCGCTCCGCGGATAGCTTCCGGCAGCACCTCCTGGAAAAATATTCACTGCCGCTGCGGGCGCA CGCCCATGTGGACAAGTCAGCCAATCCCGCGATTACGCGCCCCTTGCGCGAATTGTGGGAGGCCACCGACCTTTCCGCGG CCGATTTCGCCGATGAAGTATCCGACTATTTTGCACTGCCGCGGCTGAGCCTTCCGCAACTGCTCGCGGCTACACCTCGT CTCGACGGCTTTTCGCGCCGTTTCCTGCGTGAATCCACGATCTTTCCCTTCAGTGCGACGAGTGACGTTTTCAGATTGGC TGTTGCCGATCCTTCCGACACCGCTGCCATTCGCGCGGCCGAAATCGTCTTCGGAACGCCGGTCGATGTCGTCGTGGCGT CATATGAGGACATTACGACGGTACTCGATCAGCGCACCGAGGCGGGCGATGCGAAGGCCGAGGACGGCGTGCGCAGCATC GCGCAGCAGTCCGACGACGACATCGAGAGCCTGCGCGATCTCGCCAGCGGTGCGCCGGTGGTGCGCGCGCTCAACGATCT CCTCGAGCGTGCGGTGGAATTGCGCGCCAGCGACATTCATGTCGAGCCGTTCCGCGCCGGGCTCACGGTGCGCATGCGCG TGGATGGCCTGTTGCGCGCGCTGCCGTCGCCGCACGGCATTCCGCCGCAGGCGCTGATCTCGCGCATCAAGATTCTCGCC AGCCTCAACATCGCGGAACGGCGGCTGCCGCAGGACGGCGCCGCGCGCGTGCGCGTCGGGCGCGGCGAGATCGACGTCCG CGTCGCGACCATGCCGACGCAGCATGGCGAGAGCGCCGTCATCCGCCTGCTGCCGCGCGACCGCGGCCTGCTGGAAATGG GCAAGCTCGGCCTTGCCGCGCACGACGAGAGGGCGATGACGCGGCTGCTCGCGATGCCGCACGGCATGATAGTGATCACC GGCCCGACCGGCAGCGGCAAGACCACGACGCTCGCCACCATGCTGTCGATCCTCAACGAACCGACGCGCAAGATCCTGAC CATCGAGGATCCCGTCGAATACGAGATCCCCGGCATCAACCAGTCCCAGGTCAAGCCGTCGATCGGACTGACCTTCGCCT CCGCCATGCGCGCCTTCGTGCGCCAGGACCCCGACGTCATCATGGTCGGCGAGGTCCGCGACGCCGAGACCGCTCATATC GCGATCCATGCCGCGCTGACCGGCCATCTCGTGCTGACGACGCTGCACACCGAGACCGCGGCCGCCGCCGTGCCGCGCCT GATCGATCTCGGCATCGAGGGCTTCCTGCTCAAGTCCACGCTGCGCGCGGTGGTCGCGCAGCGCCTGGTACGCATGCTCT GCGACCGCTGCAAGGTGCCGCACACGCTGACCGAGGCCGATCTCGCCAAGGACCCGCGCTTTGCGGTGATCGGATTCAAG TGCGGCGAGGTCGTGCACGAGGCCGGCGGCTGCGAACGCTGCGGCGGCACCGGCTATCGCGGGCGCAACGGCGTGTTCGA GATCCTGGAGATGTCCGACGAGGTGCGCACGCTGATCGGCCCGCAGACCGACTCCCATTCGATCGATGCCGCCGCGATGC GCGGCGGCATGACGACGATGCTGGAGGATGCGGTCGCCAAATGCCGGGCCGGGCTGACGACGGTCCCCGAAGTCTTCCGC GTCACGACGGTGCGCTAG Protein sequence : MNAMRDRSADSFRQHLLEKYSLPLRAHAHVDKSANPAITRPLRELWEATDLSAADFADEVSDYFALPRLSLPQLLAATPR LDGFSRRFLRESTIFPFSATSDVFRLAVADPSDTAAIRAAEIVFGTPVDVVVASYEDITTVLDQRTEAGDAKAEDGVRSI AQQSDDDIESLRDLASGAPVVRALNDLLERAVELRASDIHVEPFRAGLTVRMRVDGLLRALPSPHGIPPQALISRIKILA SLNIAERRLPQDGAARVRVGRGEIDVRVATMPTQHGESAVIRLLPRDRGLLEMGKLGLAAHDERAMTRLLAMPHGMIVIT GPTGSGKTTTLATMLSILNEPTRKILTIEDPVEYEIPGINQSQVKPSIGLTFASAMRAFVRQDPDVIMVGEVRDAETAHI AIHAALTGHLVLTTLHTETAAAAVPRLIDLGIEGFLLKSTLRAVVAQRLVRMLCDRCKVPHTLTEADLAKDPRFAVIGFK CGEVVHEAGGCERCGGTGYRGRNGVFEILEMSDEVRTLIGPQTDSHSIDAAAMRGGMTTMLEDAVAKCRAGLTTVPEVFR VTTVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-68 | 44 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-68 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BJ6T_36780 | YP_005608540.1 | general secretion pathway protein E | VFG0182 | Protein | 5e-75 | 47 |
| BJ6T_36780 | YP_005608540.1 | general secretion pathway protein E | VFG1876 | Protein | 2e-77 | 45 |
| BJ6T_36780 | YP_005608540.1 | general secretion pathway protein E | VFG2048 | Protein | 5e-68 | 44 |
