Gene Information

Name : BJ6T_29430 (BJ6T_29430)
Accession : YP_005607807.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3034183 - 3034950 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGGCTATTCCCACGTCAGCAAGAACTTCGGCTCACTCAAGGCCGTCGACGATGTGTCGCTCGATATCGCCGAGGG
CGAATTTCTGGCCATCGTCGGCGGCTCCGGCTCCGGCAAGACCACGCTGCTGCGGCTCGCCAACCGGCTGATCGAGGCCG
ATGGCGGCACCATCACGGTCGAGGGCGAGGATGTGCAAACCATCGATCCGGTCGCGCTGCGGCGCCGGATCGGTTACGTC
TTCCAGAGCGGCGGGCTGTTTCCGCATCTGAGCGTCGCCGACAATATCGGGATCACGCCAAGGCTGCTGGGCGCACCGGC
AGCGGACATCACCGCGCGGGTCGACCAGCTGCTCGAGCTCGTGCAACTTGACCGTGGCGCGCATCGCGATCGCCTGCCCG
AGGCGCTCTCCGGCGGCCAGCGCCAGCGCGTCGGGGTGGCGCGAGCGCTCGCGGCGCGACCCCGCATTGTGCTGATGGAC
GAGCCGTTCGGCGCGCTCGATCCCCTCACCCGCGATGCGCTCGGCGAGGATTTTCGCGAGCTGCATCGCAAGCTCGGCCT
GACCACGGTCATGATCACCCATGACATGACGGAGGCGATCCTGCTCGCCGACCGCATCGCGGTGATGCGCAGCGGACAGC
TGCTGGCGCAGGGCACGCCCGCGGAACTCTCGACGAGCGGCGACGCCTATGTGCTGGAGCTGCTGCGCACGCCGCGGCGC
CAGGTCGAGCGGCTGAACGCGCTATTGCCACAGAGCGGTGCGGCATGA

Protein sequence : 
MIGYSHVSKNFGSLKAVDDVSLDIAEGEFLAIVGGSGSGKTTLLRLANRLIEADGGTITVEGEDVQTIDPVALRRRIGYV
FQSGGLFPHLSVADNIGITPRLLGAPAADITARVDQLLELVQLDRGAHRDRLPEALSGGQRQRVGVARALAARPRIVLMD
EPFGALDPLTRDALGEDFRELHRKLGLTTVMITHDMTEAILLADRIAVMRSGQLLAQGTPAELSTSGDAYVLELLRTPRR
QVERLNALLPQSGAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 4e-45 48
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-45 48
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_29430 YP_005607807.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-20 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_29430 YP_005607807.1 ABC transporter ATP-binding protein VFG2059 Protein 5e-17 46