Gene Information

Name : BJ6T_27670 (BJ6T_27670)
Accession : YP_005607633.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : thiamine biosynthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2849246 - 2851144 bp
Length : 1899 bp
Strand : -
Note : -

DNA sequence :
ATGAACATCCGCTCCAACCCCGAAAAGACCGTCCCCGCCGTCACCACCGGCCCGCTGCCCTCGTCGCGAAAGATCTTCGC
GTCTCCGGACGCTGCGCCCGACATCCGCGTGCCCCTGCGCGAAATCATCCTCTCGGAAGGCGCCGGCGAGCCGAACCTGC
CGGTCTATGACACCTCGGGCCCCTACACCGATCCGTCCGTGACGATCGACGTCAACGCCGGCCTCGCCCGCGGCCGCAAG
GCCTGGGTGCTCGAACGCGGCGGCGTCGAGGAGTATGAGGGGCGCCAGATCAAGCCGGAGGACAATGGCAGCGTCTCCAC
CGACAAGGCCGCGCGCGCCTTCTCGGCCTATCACAAGCCGCTGCGCGGGCTGGACGGCCACAAGATCACGCAGCTCGAAT
TCGCCCGCGCCGGCATCATCACCAAGGAGATGATCTACGTCGCCGCCCGCGAAAACCTCGGCCGCAAGCAGCAGCTCGAG
CGCGCCGAGGCCGCGCTCGCCGACGGCGAAAGCTTCGGCGCTTCTGTCCCCGCCTTCATCACGCCGGAGTTCGTGCGCAG
CGAGATCGCGCGCGGCCGCGCCATCATCCCCTCCAACATCAACCACAGCGAACTCGAGCCGATGATCATCGGCCGCAACT
TCCTGACCAAGATCAACGCCAATATCGGCAACTCGGCGGTGACCTCGTCGGTCGAGGAAGAGGTCGAGAAGATGGTGTGG
GCGATCCGCTGGGGCGCCGACACCGTGATGGACCTCTCCACGGGCCGCAACATCCACACCACCCGTGAATGGATTTTGCG
CAACGCGCCGGTGCCGATCGGCACCGTTCCCATCTATCAGGCGCTGGAGAAGTGCAACGGCGATCCCGTCAAGCTGACCT
GGGAGCTCTACAAGGACACGCTGATCGAGCAGTGCGAACAAGGCGTCGATTACTTCACCATCCACGCCGGCGTGCGCCTG
TCCTACATTCACCTCACCGCCAACCGCGTCACCGGCATCGTCTCGCGCGGCGGCTCGATCATGGCGAAGTGGTGCCTCGC
GCATCACAAGGAGAGCTTCCTCTACACCCATTTCGACGAGATCTGCGACCTCATGCGCAAGTATGACGTCTCGTTCTCGC
TCGGCGACGGCCTGCGCCCCGGCTCGATCGCCGACGCCAACGACCGCGCGCAGTTCGCCGAACTGGAGACGCTCGGCGAG
CTCACGAAAATCGCGTGGGACAAGGGCTGCCAGGTGATGATCGAGGGCCCCGGCCACGTGCCGATGCACAAGATCAAGAT
CAACATGGACAAGCAGCTCAAGGAATGCGGCGAGGCGCCGTTCTACACGCTTGGACCGCTGACCACCGACATCGCGCCGG
GCTATGACCACATCACCTCGGGCATCGGTGCCGCCATGATCGGCTGGTTCGGCTGCGCCATGCTCTGCTACGTCACGCCG
AAGGAGCATCTCGGCCTGCCCGACCGTAACGACGTCAAGGTGGGCGTCATCACCTACAAGATCGCCGCGCATGCGAGCGA
TCTCGCCAAGGGCCACCCGGCCGCCCAGCTCCGCGACGACGCCCTCTCCCGCGCCCGTTTCGACTTCCGCTGGAGCGACC
AGTTCAACCTCGGCCTCGACCCCGACACCGCCAAGAACTTCCACGACGAGACCCTGCCGAAGGAAGCCCACAAGGTCGCG
CATTTCTGCTCCATGTGCGGGCCAAAGTTCTGCTCGATGAAGATCACGCAAGACGTCCGCGACTACGCGGCGACGCTGAA
TGATCCGAACAGCGTGGGCATGTCGATCAGCGGCACCGCCGAGGACGGGATGGCTAGGATGAGCGAGAAGTTCAAGGAGA
TGGGCAGCAGCGTTTATCTGGATGCGGAGAAGGTGAAGGAGAGCAATCGGGTGTTGTGA

Protein sequence :
MNIRSNPEKTVPAVTTGPLPSSRKIFASPDAAPDIRVPLREIILSEGAGEPNLPVYDTSGPYTDPSVTIDVNAGLARGRK
AWVLERGGVEEYEGRQIKPEDNGSVSTDKAARAFSAYHKPLRGLDGHKITQLEFARAGIITKEMIYVAARENLGRKQQLE
RAEAALADGESFGASVPAFITPEFVRSEIARGRAIIPSNINHSELEPMIIGRNFLTKINANIGNSAVTSSVEEEVEKMVW
AIRWGADTVMDLSTGRNIHTTREWILRNAPVPIGTVPIYQALEKCNGDPVKLTWELYKDTLIEQCEQGVDYFTIHAGVRL
SYIHLTANRVTGIVSRGGSIMAKWCLAHHKESFLYTHFDEICDLMRKYDVSFSLGDGLRPGSIADANDRAQFAELETLGE
LTKIAWDKGCQVMIEGPGHVPMHKIKINMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTP
KEHLGLPDRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWSDQFNLGLDPDTAKNFHDETLPKEAHKVA
HFCSMCGPKFCSMKITQDVRDYAATLNDPNSVGMSISGTAEDGMARMSEKFKEMGSSVYLDAEKVKESNRVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 66
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 66
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 63