Gene Information

Name : BJ6T_26400 (BJ6T_26400)
Accession : YP_005607506.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase B chain
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2709134 - 2711248 bp
Length : 2115 bp
Strand : +
Note : -

DNA sequence :
ATGGATACGATGAAACTGCAAAAACGTGCCCCGATGTCGGCAATGCTCGATCCCAAGATCGTTCTGCCCGCGATCAGCGC
GTCCTTCACCAAGCTAGACCCGCGGCTGATGATCAAGAACCCCGTGATGTTCGTGGTCGAGGTCGTGGCCGCGCTCACCA
CGGTGATCTTCCTGCGCGATCTCGTCACCGGCGGGGAGAATCTCGCCTTCACCTTCCAGATCATCCTCTGGCTCTGGTTC
ACGGTGCTGTTCGCCAACTTCGCCGAAGCGGTGGCCGAAGGCCGCGGCAAGGCACAGGCCGAATCGTTGCGCAAGACCCG
CACCGAGAGCCAGGCCAAGCTCCTGACCGGTGCCGGCCAGGCCTTCAAGCTCGTGCCCGGCACGAGCCTCAAGGTCGGCG
ACATCGTGCTGGTCGAGGCCGGTGACGTCATCCCCTCCGACGGCGAGGTGATCGAAGGCGTCGCTTCCGTCAACGAAGCA
GCCATCACCGGCGAGTCCGCGCCCGTGATCCGCGAGTCCGGCGGCGATCGGTCGGCCGTGACCGGCGGCACGCAAGTGCT
GTCCGACTGGATCCGGGTCCGCATCACGGCCGCGCAAGGCTCGACCTTCATCGACCGCATGATCAAGCTGGTCGAGGGCG
CCGAGCGGCAGAAGACGCCGAACGAGATCGCGCTCAACATCCTGCTCGCCGGCCTCACCATCATCTTCGTGTTCGCCACC
GTCACCATTCCGAGCTATGCGGCTTATGCCGGCGGCTCGATCTCGGTGGTCGTGCTGGTCGCGCTGTTCGTGACGTTGAT
CCCGACCACGATCGGCGCGCTGCTGTCGGCGATCGGTATCGCCGGCATGGACCGCCTGGTCCGCTTCAACGTGCTGGCGA
TGTCGGGCCGCGCGGTCGAGGCTGCCGGTGACGTCGACACGCTGCTGCTCGACAAGACCGGTACGATCACGCTCGGCAAC
CGTCAGGCCACCGCGTTCCGCCCGGTCCGCGGCGTCACCGAGCAGGAGCTCGCGGACGCAGCCCAGCTCGCCTCTCTCGC
CGACGAGACGCCGGAAGGCCGCTCCATCGTCGTGCTGGCGAAGGAGAAGTATTCCATTCGCAGCCGGGACATGGCCGAGC
TTGGCGCCACCTTCATTCCGTTCACGGCACAGACCCGCATGAGCGGCGTCGATGCCGGCGGCTCGTCGGTGCGCAAGGGC
GCGGTCGATGCCATGCTAAACTATGTCGGTGGCGGCGCACCTCTGGCTGTCGCTTCGGGTAACGCGGCGCGCGCTCTCCA
GCCTGCCGCGCTTTCGGACGCCGGTCGTGAGATCCAGGCCATCGCCGACGAGATCTCGAAAGCGGGTGGTACGCCGCTGG
CTGTCGCCAAGGACGGCAAGCTGCTCGGCGTGATCCAGCTCAAGGATATCGTCAAGGGCGGCATCCGCGAGCGCTTCGCA
GAACTGCGCCGCATGGGCATCCGCACCATCATGATCACGGGCGACAACCCGATGACGGCCGCTGCGATCGCGGCGGAGGC
GGGCGTCGATGATTTCCTCGCGCAGGCAACGCCCGAGGACAAGCTCAAGCTGATCCGCGACGAGCAGGCCAAGGGCAAGC
TGGTCGCCATGTGCGGCGACGGCACCAACGACGCGCCGGCGCTCGCGCAGGCCGACGTCGGTGTCGCCATGAACACCGGT
ACCCAGGCCGCCCGCGAGGCCGGCAACATGGTCGACCTCGATTCCAACCCGACCAAGCTGATCGAGGTGGTCGAGATCGG
CAAGCAGCTGCTGATGACGCGCGGTGCGCTGACGACGTTCTCGATCGCCAACGACGTCGCAAAGTATTTTGCGATCATCC
CGGCGATGTTCCTGGCGTTCTACCCGCAGCTCAACGTGCTCAACGTCATGAGCCTGTCGAGCCCGCAGAGCGCCATCCTG
TCGGCGATCATCTTCAACGCGCTGGTCATCATCGCGCTGATCCCGCTGGCGCTGAAAGGCGTCGCCTACCGCGCGGTCGG
TGCCGGCGCGTTGCTCCGTCGCAACCTGCTGATCTACGGCCTGGGTGGAATCCTCATTCCCTTCATCGGCATCAAGGCGA
TCGACCTCGTCGTCACCGCCTTGCATCTGGCTTGA

Protein sequence :
MDTMKLQKRAPMSAMLDPKIVLPAISASFTKLDPRLMIKNPVMFVVEVVAALTTVIFLRDLVTGGENLAFTFQIILWLWF
TVLFANFAEAVAEGRGKAQAESLRKTRTESQAKLLTGAGQAFKLVPGTSLKVGDIVLVEAGDVIPSDGEVIEGVASVNEA
AITGESAPVIRESGGDRSAVTGGTQVLSDWIRVRITAAQGSTFIDRMIKLVEGAERQKTPNEIALNILLAGLTIIFVFAT
VTIPSYAAYAGGSISVVVLVALFVTLIPTTIGALLSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGN
RQATAFRPVRGVTEQELADAAQLASLADETPEGRSIVVLAKEKYSIRSRDMAELGATFIPFTAQTRMSGVDAGGSSVRKG
AVDAMLNYVGGGAPLAVASGNAARALQPAALSDAGREIQAIADEISKAGGTPLAVAKDGKLLGVIQLKDIVKGGIRERFA
ELRRMGIRTIMITGDNPMTAAAIAAEAGVDDFLAQATPEDKLKLIRDEQAKGKLVAMCGDGTNDAPALAQADVGVAMNTG
TQAAREAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFLAFYPQLNVLNVMSLSSPQSAIL
SAIIFNALVIIALIPLALKGVAYRAVGAGALLRRNLLIYGLGGILIPFIGIKAIDLVVTALHLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpB NP_814334.1 potassium-transporting ATPase subunit B Not tested Not named Protein 9e-164 60
ef0088 AAM75291.1 EF0088 Not tested Not named Protein 7e-164 60
kdpB NP_373310.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-136 55
kdpB YP_190029.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-136 55
kdpB YP_251949.1 potassium-transporting ATPase subunit B Not tested SCCmec Protein 2e-137 55
kdpB BAA82181.1 potassium-transporting ATPase(B chanin) Not tested Type-II SCCmec Protein 4e-136 55
SAR0071 YP_039539.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-136 55
kdpB(SCCmec) NP_370597.1 potassium-transporting ATPase subunit B Not tested Type-II SCCmec Protein 6e-136 55