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Name : fliI (BJ6T_25130) Accession : YP_005607379.1 Strain : Bradyrhizobium japonicum USDA 6 Genome accession: NC_017249 Putative virulence/resistance : Virulence Product : flagellum-specific ATP synthase Function : - COG functional category : - COG ID : - EC number : - Position : 2587057 - 2588382 bp Length : 1326 bp Strand : - Note : - DNA sequence : TTGAACGCTCTTCGGCAACTCGAGTGGGCGCTGCTGGAGCTTCAGCAGAGCACTCCCCTGGCCAGCGTCAGCGGCGCGAT CTCCGAGATCGCTCCGACGCATTTCCGCGTCTCCGGCCTGTCGCGCTTCGTCAGGCTCGGTGAACTGATCGGCGTCAACT CCGGCGGCAAGCCCCAGATCGGCGAGGTGGTGCGGATCGACAGCGAGGGCATCATCGCCAAGCCGTTCGACCGGCAGTTC GCCGGCGGCCTCGGCTCGGTCGCCTACCGAATGCCGCCACTGTCCTTCGCGCCCGATCCGAGTTGGAAGGGCCGCGTCAT CAACGCGCTCGGCGCGCCGCTCGACGGACAAGGTCCGCTCACCCCGGGATCGCGCGCCGTCTCGGCGGAAGCCGAGGCGC CGGCGGCGATGAGGCGGGCCCGCGTCCACAAGCCGCTGCGCACCGGCGTGCGCGTCATCGACCTGTTCGCCCCGATCTGC GCCGGCCAGCGCGTCGGCATCTTTGCCGGCTCCGGCGTCGGCAAGTCGACGCTGCTGGCGATGCTGGCCCGCAGCCAGGG CTTTGACACCGTCGTGCTGGCACTCGTCGGCGAACGCGGACGCGAGGTGCGCGAATTCATCGAGGACGTGCTCGGCGCCA ACCGCAGCCGCGCCATCACCATCGTATCGACGGGAGATGAAAGCCCGATGATGCGGCGGCTGGCGCCGAAGACCGCCATG GCGGTCGCCGAATATTTCCGTGACCGGGGCGAATCGGTCCTGCTGGTGGTCGATTCGATCACCCGTTTCGCCCATGCCGC CCGCGAGGTCGCCCTCGCCGCCGGCGAGCCTGCGGTCGCCCGCGGTTATGCACCGACGGTCTTCACCGACCTGCCCCGCC TGCTGGAGCGCGCCGGCCCCGGCGAGGAGGGATCCGGGACGATTACCGGCATTTTCTCCGTGCTGGTCGACGGCGACGAT CACAACGAGCCGATCGCCGACACCATCCGCAGCACCCTCGACGGCCACATCGTGCTCTCCAGGCACATCGCCGACCAGGC GCGCTATCCCGCCGTCGACGTTCTGGCCTCGGTCTCCCGCCTCGCCCACAACGTCTGGGACCCCGAGGAGCGCGAATTGG TGAGCAAGCTGCGCACCATGATCGCCAAATACGAGGACACGCGCGACCTTCGCCTGATGGGCGGATATCAGTCGGGGCGT GATTCGGGTCTCGACCAGGCCGTCGACATGGTCCCGAAAATCTACAGCGCCATGCGGCAGGACGCCTCGGCAGGGCCGAG CGCCGATCCATTCCGCGAGCTGCGAGACATGCTCAAGGGCGACTAG Protein sequence : MNALRQLEWALLELQQSTPLASVSGAISEIAPTHFRVSGLSRFVRLGELIGVNSGGKPQIGEVVRIDSEGIIAKPFDRQF AGGLGSVAYRMPPLSFAPDPSWKGRVINALGAPLDGQGPLTPGSRAVSAEAEAPAAMRRARVHKPLRTGVRVIDLFAPIC AGQRVGIFAGSGVGKSTLLAMLARSQGFDTVVLALVGERGREVREFIEDVLGANRSRAITIVSTGDESPMMRRLAPKTAM AVAEYFRDRGESVLLVVDSITRFAHAAREVALAAGEPAVARGYAPTVFTDLPRLLERAGPGEEGSGTITGIFSVLVDGDD HNEPIADTIRSTLDGHIVLSRHIADQARYPAVDVLASVSRLAHNVWDPEERELVSKLRTMIAKYEDTRDLRLMGGYQSGR DSGLDQAVDMVPKIYSAMRQDASAGPSADPFRELRDMLKGD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| XC_3006 | YP_244074.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-64 | 48 |
| hrcN | NP_636610.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 2e-64 | 48 |
| hrcN | AAP34339.1 | HrcN | Virulence | Hrp PAI | Protein | 2e-64 | 47 |
| hrcN | NP_640767.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 3e-64 | 47 |
| ssaN | YP_216423.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 3e-62 | 45 |
| ssaN | NP_456113.1 | putative type III secretion ATP synthase | Virulence | SPI-2 | Protein | 8e-62 | 45 |
| ssaN | CAA70537.1 | secretion system apparatus | Virulence | SPI-2 | Protein | 3e-62 | 45 |
| ssaN | NP_805086.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 8e-62 | 45 |
| ssaN | NP_460380.1 | type III secretion system ATPase | Virulence | SPI-2 | Protein | 4e-62 | 45 |
| YPO0267 | YP_002345348.1 | type III secretion system ATPase | Virulence | Not named | Protein | 4e-66 | 44 |
| hrcN | AAT96299.1 | HrcN | Virulence | S-PAI | Protein | 2e-52 | 44 |
| hrcN | AAT96258.1 | HrcN | Virulence | S-PAI | Protein | 7e-53 | 44 |
| hrcN | YP_362163.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 6e-64 | 43 |
| hrpB6 | AAB08461.1 | HrpB6 | Virulence | Hrp PAI | Protein | 5e-64 | 43 |
| hrcN | AAT96339.1 | HrcN | Virulence | S-PAI | Protein | 4e-52 | 43 |
| hrcN | AAR25633.1 | type III secretion cytoplasmic ATPase HrcN | Not tested | Not named | Protein | 2e-50 | 42 |
| hrpB6 | AAF61281.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-64 | 42 |
| hrcN | YP_198730.1 | type III secretion system ATPase | Virulence | Hrp PAI | Protein | 5e-64 | 42 |
| hrpB6 | BAB07852.1 | HrpB6 | Virulence | Hrp PAI | Protein | 3e-64 | 42 |
| escN | AAC38383.1 | EscN | Virulence | LEE | Protein | 1e-56 | 41 |
| escN | AAC31513.1 | L0034 | Virulence | LEE | Protein | 2e-56 | 41 |
| escN | NP_290268.1 | hypothetical protein | Virulence | LEE | Protein | 2e-56 | 41 |
| unnamed | ACU09458.1 | type III secretion apparatus H+-transporting two-sector ATPase | Virulence | LEE | Protein | 2e-56 | 41 |
| ECs4568 | NP_312595.1 | EscN | Virulence | LEE | Protein | 2e-56 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG0390 | Protein | 3e-61 | 50 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG0048 | Protein | 1e-65 | 49 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG2144 | Protein | 2e-64 | 46 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG0515 | Protein | 2e-62 | 45 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG2331 | Protein | 3e-62 | 43 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG0730 | Protein | 8e-57 | 41 |
| fliI | YP_005607379.1 | flagellum-specific ATP synthase | VFG0812 | Protein | 9e-57 | 41 |
