Gene Information

Name : BJ6T_21090 (BJ6T_21090)
Accession : YP_005606976.1
Strain : Bradyrhizobium japonicum USDA 6
Genome accession: NC_017249
Putative virulence/resistance : Virulence
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2176712 - 2177404 bp
Length : 693 bp
Strand : +
Note : -

DNA sequence : 
ATGACCGGAGGTCACCGTCGCATTCTGGTCGTCGAGGACGATCCGGAAACCGCAGGCCAGCTCGTCGAGGAACTGACCAC
CTCGGGCTACGACGTCGATCTTGCCGCGACGGGTCGTGAAGCCCTGAGTCACGGCGTCGCCCGCGACTATGCCGTGATCA
CCATCGACCGCATGCTGCCCGACATCGACGGCATCGCCGTGATGCGCCAGTTGCGCGACGACGGCATCGCCGCGCCCTTC
CTGATCATCTCCGCGCTCGGCGAGGTCGACGACCGCGTGCGCGGTTTGCGCGCCGGCGGCGATGACTATCTCGTCAAGCC
GTTCTCGTTCGTCGAGCTGCTGGCGCGCCTCGAGGCGCTGGGCCGGCGCAGCGAGACCGTCGCCAAGGAAACGATTTTGC
GGGTCGGCGATCTCGCAATCGACCTGATCGCGCGCAACGCCAGCCGGCGCGGCCGGAAAATTCCGCTGCTGCCGCGCGAG
TTTCAGCTGCTCGAATATCTCGTCCGCAACGAGGGCCGCGTCGTCTCCCGGGCGATGCTGCTCCAGCATGTTTGGGACCT
GCATTTCGATCCCTCCACCAACATCATCGACGTCTATGTCGGGCGCGTCCGCCGCAAGGTCGACGATGCCCAGGCCTATC
CGCTGATCCATACCATCCGCGGCATCGGATATTGCCTCCGTGCTCCTGGCTAA

Protein sequence : 
MTGGHRRILVVEDDPETAGQLVEELTTSGYDVDLAATGREALSHGVARDYAVITIDRMLPDIDGIAVMRQLRDDGIAAPF
LIISALGEVDDRVRGLRAGGDDYLVKPFSFVELLARLEALGRRSETVAKETILRVGDLAIDLIARNASRRGRKIPLLPRE
FQLLEYLVRNEGRVVSRAMLLQHVWDLHFDPSTNIIDVYVGRVRRKVDDAQAYPLIHTIRGIGYCLRAPG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-32 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0125 Protein 3e-38 46
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0083 Protein 4e-41 44
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0111 Protein 4e-44 44
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0197 Protein 6e-37 44
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0347 Protein 3e-39 43
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0308 Protein 1e-36 43
BJ6T_21090 YP_005606976.1 two-component response regulator BAC0638 Protein 2e-35 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BJ6T_21090 YP_005606976.1 two-component response regulator VFG0596 Protein 1e-32 42
BJ6T_21090 YP_005606976.1 two-component response regulator VFG1390 Protein 1e-35 41