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Name : BJ6T_15110 (BJ6T_15110) Accession : YP_005606386.1 Strain : Bradyrhizobium japonicum USDA 6 Genome accession: NC_017249 Putative virulence/resistance : Virulence Product : ATP-dependent protease, ATP-binding subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1578037 - 1580679 bp Length : 2643 bp Strand : + Note : - DNA sequence : ATGAACATCGATAAATATACTGAACGCTCCAGGGGCTTCGTCCAGTCTGCGCAATCGCTTGCGGTACGCGAGGGACATCA GCAGTTTTCGACCCTGCACGTCCTGAAGGTTCTGCTGGACGACAATGAGGGCCTCGCTGCCGGTCTGATCGACCGCGCCG GCGGCAATTCCCGCGCCATCCTGAAGGCGACCGAGGACGCCCTCAACAAGGTGCCGAAGGTCTCCGGCGGCGGCGCCGGC CAGATCTATCTGGCGCCCGAGCTCGCCCGCACTTTCGACGCCGCCGAAAAGGCCGGCGAGAAGGCCGGCGACAGCTTTGT CACCGTCGAGCGGCTGCTACTCGGCCTCGCGCTGGAAAAGACCAGCGAGGCCGGCGCGATCCTGGCCAAGGGCGGCGTCA CCCCGCAAAATCTCAATGCGGCGATCGAGGCGCTGCGCAAGGGCCGGACGGCGGACTCCGCGACCGCCGAGAACGCCTAT GACGCGCTGAAGAAATATGCCCGCGACCTGACCCAGGCTGCGCGCGACGGCAAGCTCGACCCGGTCATCGGCCGCGACGA GGAGATCCGCCGCACCATCCAGGTGCTCTCGCGCCGGACCAAGAACAATCCCGTCCTGATCGGTGAACCCGGCGTCGGCA AGACCGCCATCGCCGAGGGCCTCGCGCTGCGCATCGTCAACGGCGACGTGCCCGAGACCCTGCAGGACAAGAAGCTGCTC TCGCTCGATCTCGGCGCGCTGATTGCGGGTGCGAAGTACCGCGGCGAGTTCGAGGAGCGGCTGAAGGCCGTGCTCCAGGA AGTCACCGCGAGCGAGGGCACCTTCATCCTATTCATCGACGAGATGCATACGCTGATCGGCGCCGGCAAGGGCGATGGCG CGATGGACGCATCCAACCTGCTCAAGCCCGCGCTCGCGCGCGGCGAGCTGCACTGCATCGGCGCCACCACGCTCGACGAG TACCGCAAGCACGTCGAGAAGGATGCGGCGCTGGCGCGGCGCTTCCAGCCGATCTTCGTCAGCGAGCCCTCGGTCGAGGA CACCATCTCGATCCTCCGCGGCTTGAAAGACAAGTACGAGCAGCACCACGGCGTGCGGATCACCGATTCCGCGCTCGTGG CGGCGACGACGCTGTCCAACCGCTACATCACCGACCGCTTCCTGCCGGACAAGGCGATCGACCTCATGGACGAGGCGGCC GCGCGGCTGAAGATGCAGGTCGATTCCAAGCCGGAAGAGCTGGATTCGCTCGACCGTGAGATCATCCGGCTCAAGATCGA GCAGGAAGCTCTCAAGAAGGAGAGCGATCTCGGCTCCAAGACCCGTCTCGAGGGGCTTCAGAGGGAGCTCAGCGAGCTCG AAGAGAAATCCGCGGCCCTGACGTCGCGCTGGAGCGCGGAGAAGAACAAGCTCTCCAACGCCCAGAAGCTGAAGTCGGAG CTCGACGCGCTGCGCGTCGATCTCGCCGACGCACAGCGGCGCGGCGAATTCCAGAAGGCCGGCGAGCTGGCCTATGGCCG GATCCCGCAGCTCGAGAAGCAGCTCGCGGACATCGAGGCGCGTGAGGGCTCCGGCGATATGATGGAGGAGGCGGTCACCG CCAACCACATCGCGCAGGTGGTCTCGCGTTGGACCGGCGTGCCCGTCGACAAGATGCTGGAAGGCGAGAAGGAGAAGCTC CTGAAGATGGAGGAGCAGCTCGGCAAGCGCGTCGTCGGCCAGGCCGAGGCCGTGCGTGCGGTCGCGACCGCCGTGCGCCG TTCGCGCGCGGGCCTGCAGGACCCGAACCGGCCGACCGGCTCGTTCATGTTCCTGGGGCCGACCGGCGTCGGCAAGACCG AGCTGACGAAGGCGCTCGCGGAGTACCTGTTCAACGACGAGACCGCGATGGTCCGCCTCGACATGTCCGAGTACATGGAG AAGCACTCGGTCTCGCGGCTGATCGGTGCGCCTCCCGGCTATGTCGGCTATGACGAGGGCGGCGCGCTCACCGAAGCGGT GCGGCGCCGGCCCTATCAGGTGGTGCTGTTTGACGAGATCGAGAAGGCGCATCCTGACGTCTTCAACGTCCTGTTGCAGG TGCTCGACGACGGCCGCCTGACCGATGGCCAGGGCCGCACCGTCGATTTCCGCAACACGCTGATCATCATGACCTCGAAC CTTGGTTCGGAGTATCTGGTGAATCAACCGGAGGGCGAAGACACCTCAGCCGTGCGTGAACAGGTGATGGGAATGGTGCG TGGGCATTTCCGGCCCGAGTTCCTGAACCGTGTCGACGAGATCATCCTGTTCCACCGCCTGCAGAGGAGCGAGATGGGGC GGATCGTCGAGATCCAGTTCGCCCGGCTGCAGAAGCTTTTGACCGATCGCAAGATCGTGCTGACGCTCGATGCCGCGGGC CGCGACTGGCTTGCTGCGAAGGGCTGGGATCCCGCCTACGGCGCGAGGCCGCTGAAGCGCGTGGTCCAGCGCTACCTCCA GGATCCGCTCGCAGAGATGATCCTGGCCGGCGACGTCAGGGATGGGGACAACGTTGCGATCTCGTCCGAAGGCAACGTGC TGACCTTCAACGGCAAGGCGCCGCAGACCGCGGAGATCGCCCAGTTCGAGGCGCCGCCGGTGTCGAAGCGGAAGCTGAAC TGA Protein sequence : MNIDKYTERSRGFVQSAQSLAVREGHQQFSTLHVLKVLLDDNEGLAAGLIDRAGGNSRAILKATEDALNKVPKVSGGGAG QIYLAPELARTFDAAEKAGEKAGDSFVTVERLLLGLALEKTSEAGAILAKGGVTPQNLNAAIEALRKGRTADSATAENAY DALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVNGDVPETLQDKKLL SLDLGALIAGAKYRGEFEERLKAVLQEVTASEGTFILFIDEMHTLIGAGKGDGAMDASNLLKPALARGELHCIGATTLDE YRKHVEKDAALARRFQPIFVSEPSVEDTISILRGLKDKYEQHHGVRITDSALVAATTLSNRYITDRFLPDKAIDLMDEAA ARLKMQVDSKPEELDSLDREIIRLKIEQEALKKESDLGSKTRLEGLQRELSELEEKSAALTSRWSAEKNKLSNAQKLKSE LDALRVDLADAQRRGEFQKAGELAYGRIPQLEKQLADIEAREGSGDMMEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKL LKMEEQLGKRVVGQAEAVRAVATAVRRSRAGLQDPNRPTGSFMFLGPTGVGKTELTKALAEYLFNDETAMVRLDMSEYME KHSVSRLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIIMTSN LGSEYLVNQPEGEDTSAVREQVMGMVRGHFRPEFLNRVDEIILFHRLQRSEMGRIVEIQFARLQKLLTDRKIVLTLDAAG RDWLAAKGWDPAYGARPLKRVVQRYLQDPLAEMILAGDVRDGDNVAISSEGNVLTFNGKAPQTAEIAQFEAPPVSKRKLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 5e-103 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BJ6T_15110 | YP_005606386.1 | ATP-dependent protease, ATP-binding subunit | VFG2076 | Protein | 1e-110 | 45 |
| BJ6T_15110 | YP_005606386.1 | ATP-dependent protease, ATP-binding subunit | VFG2084 | Protein | 3e-110 | 43 |
