Gene Information

Name : BM590_A0938 (BM590_A0938)
Accession : YP_005600386.1
Strain :
Genome accession: NC_017246
Putative virulence/resistance : Resistance
Product : quaternary ammonium compound-resistance protein qacF
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 922922 - 923254 bp
Length : 333 bp
Strand : -
Note : -

DNA sequence : 
ATGCCGGTTTATACTTTTCTCGCCATTGCAATCTTTTCCGAAGTCATCGGCACACTAAGCCTCAAGGCATCGGAAGGGTT
TTCGCGCCTTGGCCCATCCATCGTGGTGGTGGTCGCCTATGGCCTCGCCTTCTATTTCATGTCACTAACGCTGAAAACAA
TCCCGGTCGGTGTCGCCTATGCGATCTGGTCCGGCGTTGGCGTAACGCTGGTGGCGCTCATCGGCTGGCTGGTATTCGGG
CAGAAGCTGGATCTTCCCGCAATTGTCGGCATGGGCCTCATCATCGCGGGCGTAATCGTCTTGAATTTGCTTTCCAACAC
CGCTCAGCATTAG

Protein sequence : 
MPVYTFLAIAIFSEVIGTLSLKASEGFSRLGPSIVVVVAYGLAFYFMSLTLKTIPVGVAYAIWSGVGVTLVALIGWLVFG
QKLDLPAIVGMGLIIAGVIVLNLLSNTAQH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
qacEdelta1 AGK07100.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 AGF34989.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 CAJ77049.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-24 62
qacEdelta1 ACN81026.1 QacEdelta1 Not tested AbaR5 Protein 2e-24 62
qacEdelta1 AGK07109.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 AGF35028.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 CAJ77052.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-24 62
qacEdelta1 AFV53123.1 QacEdelta1 multidrug exporter Not tested AbGRI2-1 Protein 1e-24 62
qacEdelta1 AGF35063.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 CAJ77088.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-24 62
qacEdelta1 AGK36647.1 QacEdelta1 Not tested AbaR26 Protein 1e-24 62
qacEdelta1 AGK06933.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacE-deltal ACF06159.1 quartenary ammonium compound resistance protein Not tested Tn5036-like Protein 1e-24 62
qacEdelta1 AAK02047.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-24 62
qacEdelta1 AGK06970.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacE-delta1 ACY75523.1 QacE-delta1 Not tested Tn6060 Protein 1e-24 62
qacEdelta1 AAK02056.1 quaternary ammonium compound and disinfectant protein Not tested SGI1 Protein 1e-24 62
ACICU_00227 YP_001844886.1 membrane transporter Not tested AbaR20 Protein 2e-24 62
qacEdelta1 AGK06979.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacE-delta1 ACY75532.1 QacE-delta1 Not tested Tn6060 Protein 1e-24 62
qacEdelta1 ABB48428.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacEdelta1 YP_005797134.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-24 62
qacEdelta1 AGK07016.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacE-delta1 AET25389.1 QacE-delta1 Not tested PAGI-2(C) Protein 1e-24 62
qacEdelta1 ABZ01839.1 QacEdelta1 Not tested SGI2 Protein 1e-24 62
qacEdelta1 YP_005797150.1 quaternary ammonium compound-resistance protein Not tested AbaR4e Protein 2e-24 62
qacEdelta1 AGK07074.1 QacEdelta1 Not tested SGI1 Protein 1e-24 62
qacE-delta1 AFG30112.1 QacE-delta1 Not tested PAGI-2 Protein 1e-24 62
qacEdelta1 CAJ77030.1 Quaternary ammonium compound-resistance protein Not tested AbaR1 Protein 1e-24 62
ebr YP_006098377.1 putative ethidium bromide resistance protein Not tested Tn2411 Protein 2e-24 62
unnamed CAD42067.1 hypothetical protein Not tested PAI II 536 Protein 8e-15 45
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 5e-11 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF CP004022.1.gene1549. Protein 1e-23 63
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0324 Protein 2e-30 62
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0323 Protein 6e-25 62
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0322 Protein 2e-29 61
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF CP001138.1.gene1489. Protein 5e-26 60
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0377 Protein 4e-24 57
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF NC_010410.6003348.p0 Protein 1e-25 55
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0002 Protein 1e-25 55
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0150 Protein 3e-24 54
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF NC_002695.1.913273.p Protein 3e-24 54
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0139 Protein 1e-18 52
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0192 Protein 7e-19 50
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0140 Protein 2e-15 47
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0329 Protein 6e-14 46
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0321 Protein 5e-19 42
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0325 Protein 9e-14 42
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0327 Protein 1e-13 41
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF BAC0326 Protein 3e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF VFG1586 Protein 3e-15 45
BM590_A0938 YP_005600386.1 quaternary ammonium compound-resistance protein qacF VFG1587 Protein 2e-11 41