Gene Information

Name : BM28_A0626 (BM28_A0626)
Accession : YP_005596711.1
Strain :
Genome accession: NC_017244
Putative virulence/resistance : Virulence
Product : transcriptional activator protein copR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 621748 - 622455 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAATTCTCGTTATCGAAGATGACCGCGAAGCGGCCCGTTATCTGGAAAAGGCCTTTGCCGAGGCAGGGCATTCGGC
CGATATCGCGGGCGACGGCGAAACCGGCTACGCACTTGCCGAAAACGGCAATTACGATGTGCTGGTGGTGGACCGTATGC
TGCCCAAACGCGACGGCCTTTCCGTTGTGGCGGGCCTGCGCGCCAAGGGCATGGAAACGCCGGTCCTGATCCTGTCGGCG
CTTGGCGAGGTGGATGACCGCGTGACCGGTCTGCGCGCTGGGGGCGATGATTATCTCACCAAGCCCTATGCTTTTTCCGA
ACTTCTGGCGCGTGTCGAGGTCTTGCAGCGCCGCTCAAGCCCGCGCGAGGCGGATACGATCTACCGCGTCGGCGATCTGG
AGCTTGACCGCCTTACGCATACTGCGCGCCGCCAGAGTGTTGATATTACGCTTCAACCGCGAGAATTTCGTCTTCTCGAA
TATCTCATGCGCCATGCCGGGCAGGTCGTCACCCGCACCATGCTGCTTGAAAACGTCTGGGATTACCACTTCGACCCGCA
GACCAATGTGATCGATGTTCACATTTCGCGGCTGCGCTCCAAGATTGAAAAGGGCTTTGACGAGCCGCTGCTTCATACGG
TGCGCGGGGCTGGCTATATGCTGAAGGCGGGCCGGGGCAAGCAATCCGCTGCCGCAAGGGCGGAATGA

Protein sequence : 
MKILVIEDDREAARYLEKAFAEAGHSADIAGDGETGYALAENGNYDVLVVDRMLPKRDGLSVVAGLRAKGMETPVLILSA
LGEVDDRVTGLRAGGDDYLTKPYAFSELLARVEVLQRRSSPREADTIYRVGDLELDRLTHTARRQSVDITLQPREFRLLE
YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIEKGFDEPLLHTVRGAGYMLKAGRGKQSAAARAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-38 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0125 Protein 2e-51 48
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0083 Protein 9e-47 48
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0197 Protein 1e-45 47
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0111 Protein 1e-54 45
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0347 Protein 7e-48 45
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0308 Protein 2e-46 44
BM28_A0626 YP_005596711.1 transcriptional activator protein copR BAC0638 Protein 4e-38 44
BM28_A0626 YP_005596711.1 transcriptional activator protein copR NC_002516.2.879194.p Protein 6e-28 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BM28_A0626 YP_005596711.1 transcriptional activator protein copR VFG1389 Protein 6e-36 45
BM28_A0626 YP_005596711.1 transcriptional activator protein copR VFG0596 Protein 1e-38 41
BM28_A0626 YP_005596711.1 transcriptional activator protein copR VFG1390 Protein 1e-38 41