Gene Information

Name : ctrA (BM28_A1604)
Accession : YP_005597689.1
Strain :
Genome accession: NC_017244
Putative virulence/resistance : Resistance
Product : Transcriptional regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1564343 - 1565041 bp
Length : 699 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTCCTTTTGATTGAAGACGACAGTGCTATCGCACAGAGCATTGAGTTGATGCTCAAGTCCGAGAGTTTTAATGT
CTATACGACCGATCTGGGCGAAGAAGGCATCGATCTCGGCAAGCTTTACGACTACGACATCATTCTGCTGGATCTCAATC
TGCCGGATATGTCTGGTTATGAAGTTCTTCGCACCTTGCGTCTGTCCAAGGTGAAGACGCCGATCCTTATCCTTTCCGGC
ATGGCCGGCATCGAGGACAAGGTTCGCGGTCTTGGCTTTGGCGCCGACGATTATATGACCAAGCCGTTCCATAAGGACGA
GCTGATTGCCCGTATCCATGCGATCGTCCGCCGCTCCAAGGGGCATGCCCAGTCGGTCATCACGACGGGCGACCTGGTGG
TCAATCTGGATGCCAAGACGGTGGAAGTCGCAGGCCAGCGCGTTCATCTGACCGGCAAGGAATACCAGATGCTTGAGCTG
CTTTCGCTGCGCAAGGGCACGACGCTCACCAAGGAAATGTTCCTGAACCATCTTTATGGTGGCATGGATGAGCCGGAATT
GAAGATCATCGACGTCTTCATCTGCAAGCTGCGCAAGAAGCTCGACGCCGTTTCCGGCAATCAGAGCTATATCGAAACCG
TCTGGGGGCGTGGTTATGTGCTGCGCGAGCCGGATGCCGAGATGCGCGAAAGCGCCTGA

Protein sequence : 
MRVLLIEDDSAIAQSIELMLKSESFNVYTTDLGEEGIDLGKLYDYDIILLDLNLPDMSGYEVLRTLRLSKVKTPILILSG
MAGIEDKVRGLGFGADDYMTKPFHKDELIARIHAIVRRSKGHAQSVITTGDLVVNLDAKTVEVAGQRVHLTGKEYQMLEL
LSLRKGTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLDAVSGNQSYIETVWGRGYVLREPDAEMRESA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-21 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 5e-21 41
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 5e-21 41
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 5e-21 41
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 5e-21 41
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 3e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ctrA YP_005597689.1 Transcriptional regulatory protein NC_002516.2.879194.p Protein 6e-28 43