Gene Information

Name : katA (Bint_0941)
Accession : YP_005594146.1
Strain : Brachyspira intermedia PWS/A
Genome accession: NC_017243
Putative virulence/resistance : Unknown
Product : catalase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1066621 - 1068003 bp
Length : 1383 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGATAAAAAATTAACAACTGAATTCGGTGCTCCGGTTGAAAATAATCAGCATTCTATGACAGCAGGTGCTAGAGG
ACCTATGCTTTTACAAGATGTATGGTTTATGGAAAAGATGGCACATTTTGATAGAGAAGTTATACCAGAAAGAAGAATGC
ATGCTAAAGGTTCAGGTGCTTATGGTACATTCACTGTAACTCATGATATTACACAATATACTAAAGCAAAAATATTCTCT
GAAGTTGGAAAGAAAACTGATTTATTTGTAAGATTTTCTACAGTGGCAGGTGAGAGAGGTGCGGCAGATGCTGAAAGAGA
TATAAGAGGTTTTGCTATTAAATTCTATACTGAAGAAGGAAACTGGGATTTAGTTGGTAATAATACTCCTGTATTTTATT
TCAGAGATCCTTTAAAATTTCCAGATTTGAATCATGCCGTAAAAAGAGATCCAAAAACTAATATGAGAAGTGCTCAAAAT
AAATGGGACTTCCTTACTTCTTTACCAGAAGCTATTCACCAAATAACTATAGATATGAGCGATAGAGGTATACCTTATAG
TTATAGGCATATGCATGGTTTCAGCAGTCATGCTTATAGTTTCATAAATAAAGAAGGCAAAAGATATTGGGTAAAATTCC
ATTTCAAAACTCAGCAGGGCATTAAAAATTTAACAGATCAAGAAGCTGAAGCAATCATAGCAAAAGATAGAGAAAGTTCT
CAAAAAGACTTATTTGAAGCTATTGAAAGAGGTGATTTCCCTAGATGGAATATGAAAATTCAAATAATGACTGAAGAACA
AGCTAATGCAAGCAAAAGAAATCCATTTGACTTAACAAAAACTTGGTCTCAAAAAGAATATCCTCTAATTGATGTTGGAG
TTTTAGAATTAAATAGAAATCCTGAAAACTATTTCGCAGAAGTAGAACAATCAGCATTCAGCCCTTCTACAATAGTTCCA
GGTATAGGATTCTCACCAGACAGAATGCTTCAGGGAAGATTATTCTCATACACTGATACACAAAGATATAGATTAGGTGT
TAACTATTCAAGCATACCTGTAAATGCTCCAAAATTTAAACCTAATACTTATCATAGAGACGGATATATGAGAGTAGAGT
CTAATGGTTCTAAAGTAGAATATGAACCAAACTCTCAAGGTGAATGGAAAGAGCAGAAAGAATATGCTGAACCACCTCTA
AAAATTTACGGCGATGCTTACAGATATGATCATAGAGAAGATGATGATGATTATTACACAGATGCAAGAGCTTTATTCAA
TCTTATGACAGATGCACAAAAACAAGTATTATTTGAAAATACTGCAAGAGATATGAATGGCGTTACTAAAGAAGTACAAT
TAAGACATATAAAAATTGTATGA

Protein sequence :
MSDKKLTTEFGAPVENNQHSMTAGARGPMLLQDVWFMEKMAHFDREVIPERRMHAKGSGAYGTFTVTHDITQYTKAKIFS
EVGKKTDLFVRFSTVAGERGAADAERDIRGFAIKFYTEEGNWDLVGNNTPVFYFRDPLKFPDLNHAVKRDPKTNMRSAQN
KWDFLTSLPEAIHQITIDMSDRGIPYSYRHMHGFSSHAYSFINKEGKRYWVKFHFKTQQGIKNLTDQEAEAIIAKDRESS
QKDLFEAIERGDFPRWNMKIQIMTEEQANASKRNPFDLTKTWSQKEYPLIDVGVLELNRNPENYFAEVEQSAFSPSTIVP
GIGFSPDRMLQGRLFSYTDTQRYRLGVNYSSIPVNAPKFKPNTYHRDGYMRVESNGSKVEYEPNSQGEWKEQKEYAEPPL
KIYGDAYRYDHREDDDDYYTDARALFNLMTDAQKQVLFENTARDMNGVTKEVQLRHIKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
katA ABD94664.1 catalase isozyme A Not tested ExoU island A Protein 9e-150 68
katA YP_005682539.1 catalase Not tested PiCp 3 Protein 9e-91 52
katA YP_003782575.1 catalase Not tested PiCp 3 Protein 9e-91 52
katA YP_005684630.1 catalase Not tested PiCp 3 Protein 9e-91 52
katA YP_005680448.1 catalase Not tested PiCp 3 Protein 9e-91 52