Gene Information

Name : pyk (Bint_0901)
Accession : YP_005594106.1
Strain : Brachyspira intermedia PWS/A
Genome accession: NC_017243
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1011325 - 1012758 bp
Length : 1434 bp
Strand : +
Note : -

DNA sequence : 
ATGAGAAAAACAAAAATAATAGCAACTTTAGGCCCAAGATGGTCTAGTGAAGATATGGTAAGAAAGATTATAGAAAATGG
AGCAGATGTATGCAGGTTAAATTTTTCTTTTGGAACTTATGATGAACATTTAGAAAGAATTAATATAATAAGAAAAGTTT
CAAGTGAACTTAAAAAACCAGTTGCAATATTAGCAGATTTACAAGGTCCTAAAATAAGAATAGGTAAATTAAAAGAGCCT
ATTACTGTAAAAGAAGGAGATATAGTAAAACTCAGTGGATATAAAGAAACTAATGATGATAGTATTATACCAACAACACA
TTCTAATATAGCTCATGATGTAAAATCAGGTTCTATGCTTTTGATAGCAGATGGTACTATACAGCTTATAGTTGAATCCA
GTGATGAGGCTTCAAAACTTGTTGTATGTAAGGTTATAACAGGAGGTACCATATTAAGCAGTAAAGGAATTAATCTTCCT
GGAGCACATGTTACAACAGAGGTTCTAACAGAGAAAGATGTAAGTGATGCTTTATTTGCTGCTAAGAATGGTGTTAATTA
TTTAGGAATGAGCTTTGTAAGAAAAGCTGAAGATGTTATAAGACTTAGAAAGATATTAGATGATAATAATCTTCAAGATG
TAGGTATTGTTTCAAAGATAGAAAATACAGAATCGCTTGAGAATTTAGAGGAAATTATAAAGCATTCTGATGGTGTAATG
GTAGCTAGAGGAGATTTAGGCGTTGAGATACCATTTGGAGAAGTACCTGTTTGGCAGAAAAAGATACTTAGAATGGCAAA
TGATATAGGAAAGATTACTATCATAGCTACTCAGATGTTAGAGAGTATGACTAAGAGTCCTGTGCCTTCAAGAGCTGAGG
CCAGCGATGTTGCTAATGCGGTTTTAGACGGTACAGATGTTGTTATGATGTCTGCTGAAACTGCTTCAGGTGATTATCCT
ATAGAGTCTGTTAAAGCTATGGTTTCAATAGTAGAGGCAGCTGAAAGATCTGCTATAAGGTATTCACATGACAATATGTC
TTATTTAGACAGAGGTGTCAATGATGCTCTTACTGACAGTGCTTCTTACTTATCATATTGTTTGGATAATAAAGTGATAA
TTGCCCTTTCAAGATCAGGTTATACCGTTAAAAACTTATCTAAGAAAAGACCTAAAACTCCTATTGTTTTTATGTCTGCT
GATACTGATTTATGTAACAGATTAGCTATATGTCATAATGTGTATACTATACTCATGCCTGAAGATTTGAACTTCAGTGC
AGGTATAAGTCATGGAGGTCAGATTGATATACTTGAAGATACATTAATAAAGCATAATTTAGCCAATCATGGTGATAAAG
CTATACTTGTCAGCGGAAGCAAATGGCAGGGTAGATGGCAGGAAAACAGCGTACGTGTAGTTGTTGTGCACTAA

Protein sequence : 
MRKTKIIATLGPRWSSEDMVRKIIENGADVCRLNFSFGTYDEHLERINIIRKVSSELKKPVAILADLQGPKIRIGKLKEP
ITVKEGDIVKLSGYKETNDDSIIPTTHSNIAHDVKSGSMLLIADGTIQLIVESSDEASKLVVCKVITGGTILSSKGINLP
GAHVTTEVLTEKDVSDALFAAKNGVNYLGMSFVRKAEDVIRLRKILDDNNLQDVGIVSKIENTESLENLEEIIKHSDGVM
VARGDLGVEIPFGEVPVWQKKILRMANDIGKITIIATQMLESMTKSPVPSRAEASDVANAVLDGTDVVMMSAETASGDYP
IESVKAMVSIVEAAERSAIRYSHDNMSYLDRGVNDALTDSASYLSYCLDNKVIIALSRSGYTVKNLSKKRPKTPIVFMSA
DTDLCNRLAICHNVYTILMPEDLNFSAGISHGGQIDILEDTLIKHNLANHGDKAILVSGSKWQGRWQENSVRVVVVH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 5e-64 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 6e-64 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 6e-64 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 1e-63 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pyk YP_005594106.1 pyruvate kinase VFG0479 Protein 2e-64 44