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Name : lysS (Bint_2145) Accession : YP_005595336.1 Strain : Brachyspira intermedia PWS/A Genome accession: NC_017243 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase LysU (class II) Function : - COG functional category : - COG ID : - EC number : - Position : 2461266 - 2462798 bp Length : 1533 bp Strand : - Note : - DNA sequence : ATGTCAGAAAATCAAAATAATTCTGAAAATACACAAAATGAAAAAAATACTAGTGTAGAAAAAAATGCAGAAAAAGAAAA CAGAAGAGAAAAGTTAAACACATTAAGAGGTATGGGAATAAACCCATTTCCAAACAGTTATGATGTAACTTATAAATCTA AGGATATAGCAGAGAAATTTGAAGAGTTAGAGAAGAATGAAACGGAAGTTGCAGTTGCCGGAAGAATTATGCTTTATAGA GTAATGGGTAAGTCTTCATTTTTAACTATAAAGGATGCTGTAGGTACTATTCAGGCTTATATACAAAAAGATAAAGTAGG TGATGAGTTCTATAATACAGTATTCAAAAAATTAATAGATATAGGCGATATTGTAGGCGTAAAAGGTACCGTTTTTAAAA CTAAAACAGGTGAAATTACTATATATGCAAATGAATTAAAATTATTAACTAAATCACTTAATCCATTGCCTGAAAAATTC CATGGATTAACAGATACAGAACTTCGCTACAGACAAAGATATGTTGATTTGATAATGAATGATGATGTTAAAGAAGCATT TATTAAAAGATCTAAAATGATTTCTGCTATAAGAGAAGTAATGATAGAAAATAACTTCTTGGAAGTAGAAACTCCTATGA TGCATCCTTTGATTGGAGGAGCTAAGGCTAAACCTTTCATCACACATCATAATACTTTGGATATGACATTATATTTGAGA ATAGCACCTGAACTTTATTTGAAAAGATTGGTTGTAGGCGGTTTCGACAGAGTATTTGAGCTTAATAGAAATTTCCGTAA TGAAGGTATATCTACAAGACATAATCCTGAGTTTACTATGATGGAAGCATATATGGCTTATGCTAATTTCCACAAAGTTA TGGAATTGGTAGAAGAAGTATTCTCAAAAGTATGTTTCAAATTAAATGGAAAATATACTTCTCAGTATAAAGATTATGAG ATTAATTTCAAACCTCCATTTGCAAGAGTACCTATGGTTGATTTGGTTAAAGAGCATTCAGGACTTGATTTCAATGCTAT ACAGTCAGATGATGAGGCATTAGAAAAAGCTAAATCAGTGGGTGTAGAAATAGATACTTCAAAAACTAAACCTACTAAAT GGGAAGTAATGGTTGCAGTATTTGAGGAAAAAGTTGAAGAAAAATTGATACAACCTACATTTGTTATTAATTATCCTAAA GCAGTTTCTCCTCTTTCAAAATCTTATCCTGATAATCCAGATATTACAGAGAGATACGAATTATTTATAGGTGGAATGGA GATGTCTAATGGATTCAGCGAGCTTAATGACCCAATAGACCAAAAAGAACGTTTTGAGGAACAATTAAAAGCTAAAGCAC GCGGTGAAGATGAAACTATGGATATGGACTTAGACTATATCAATGCTTTGGAATACGGACTTCCTCCTACAGGCGGACTT GGAATAGGTATTGACAGAATGGCTATATTATTCTTGAATGTTGCTAGCATTAGAGATACTATTCTTTTCCCTCAAATGAG AAAATTAGATTAA Protein sequence : MSENQNNSENTQNEKNTSVEKNAEKENRREKLNTLRGMGINPFPNSYDVTYKSKDIAEKFEELEKNETEVAVAGRIMLYR VMGKSSFLTIKDAVGTIQAYIQKDKVGDEFYNTVFKKLIDIGDIVGVKGTVFKTKTGEITIYANELKLLTKSLNPLPEKF HGLTDTELRYRQRYVDLIMNDDVKEAFIKRSKMISAIREVMIENNFLEVETPMMHPLIGGAKAKPFITHHNTLDMTLYLR IAPELYLKRLVVGGFDRVFELNRNFRNEGISTRHNPEFTMMEAYMAYANFHKVMELVEEVFSKVCFKLNGKYTSQYKDYE INFKPPFARVPMVDLVKEHSGLDFNAIQSDDEALEKAKSVGVEIDTSKTKPTKWEVMVAVFEEKVEEKLIQPTFVINYPK AVSPLSKSYPDNPDITERYELFIGGMEMSNGFSELNDPIDQKERFEEQLKAKARGEDETMDMDLDYINALEYGLPPTGGL GIGIDRMAILFLNVASIRDTILFPQMRKLD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 5e-104 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005595336.1 | lysyl-tRNA synthetase LysU (class II) | VFG1668 | Protein | 3e-104 | 54 |
