|
Name : Bint_1052 (Bint_1052) Accession : YP_005594255.1 Strain : Brachyspira intermedia PWS/A Genome accession: NC_017243 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : - COG ID : - EC number : - Position : 1185870 - 1187198 bp Length : 1329 bp Strand : + Note : - DNA sequence : TTGGAGAGTAAAGAAATGGAATATTTTACAAGTACAGATAAAGTGCTTTATAAAGGAAAAGACAGTAAAGATGCTTTTTC ATTCAAACAATATAATGCTTCAGAAGTTATAGCAGGTAAAACTATGGAAGAATGGATGCCTTTTGCAATGAGTTGGTGGC ATACATTAGCTGCTGGAAGTGCAGATCCTTTTGGAGCTCCTGCAGCAAGCAGACCTTGGAATGGTAAAGAGGCATTAGAA GCTTCTAAAATGAGAGTGGAGGCTGGATTTGAACTTATGCAGAAACTAGGAATGAATTATTTCTGTTTTCATGACAGAGA TTTAGCTCCTGAATATAAAACTCTAAAAGAAACTAATGAAAAATTAGATATGATAGTAGATTTGATACAAGAAAGTATGT CTAAAACAGGTAAGAAACTTTTATGGGCTACTTCATCTTTATTTACAAATCCTAGATATATGCATGGTGCTGCTACTAGC CCTTATGCTGATGTTTTTGCAGTTGCTGCTGCTCAGACTAAAAAAACTATGGATATAGCTAAAAAATTAAATGCTAAAGG ATATGTATTCTGGGGTGGTAGAGAAGGATATGAAACTTTACTTAATACTGATATGAAAAGAGAATTAGATCATTTGGCTT ATTTCTTATCTATGGCAGTTGAATATAAAGAAAAAATAGGATTTAAAGGACAATTCTTTATTGAGCCAAAACCAAAAGAA CCAACAAAACATCAATATGATTTTGATGCTGCTACTACTTTAGAGTTCTTATATCATTATAATTTAGACAAATATTTTGA GCTTAATTTGGAAGTAAACCATGCTACTTTGGCAGGACATACTATGCAGCATGAGATGCAGGTTGCTAGAAATCATGGAA AGTTAGGTTCTGTTGATATTAACTATGGTGATACTTTCTTGGGTTGGGATACAGATATGTTCCTTACTAATGTATATGAT GCAGTATTAATGATGGTAGAGATTATAAGAAATGGCGGATTAAAAAATGGCGGATTCAACTTCGATGCTAAAGTAAGAAG ACCATCTCATACTATGGACGATTTGATGTATGCATATATTGCTGGAATGGATACTTTAGCTTGGGGATTAAGAATAGCTG ATAAAATAGTTAAAGACGGATGTTTCGATAAATTTATTGAAGAGAGATATAGTTCTTATAATAGTGGAATAGGTGCAAAA ATAGAAAGTAAATCAACTTCATTAGAAGAGTTATATGATTATGCACTTGCATTAGAAGAAAAAGAACTTCCTAGCGGTAA TCAGGAATTACTTGAAGCTAAATTAAATCAATTTATATATAATTTATAA Protein sequence : MESKEMEYFTSTDKVLYKGKDSKDAFSFKQYNASEVIAGKTMEEWMPFAMSWWHTLAAGSADPFGAPAASRPWNGKEALE ASKMRVEAGFELMQKLGMNYFCFHDRDLAPEYKTLKETNEKLDMIVDLIQESMSKTGKKLLWATSSLFTNPRYMHGAATS PYADVFAVAAAQTKKTMDIAKKLNAKGYVFWGGREGYETLLNTDMKRELDHLAYFLSMAVEYKEKIGFKGQFFIEPKPKE PTKHQYDFDAATTLEFLYHYNLDKYFELNLEVNHATLAGHTMQHEMQVARNHGKLGSVDINYGDTFLGWDTDMFLTNVYD AVLMMVEIIRNGGLKNGGFNFDAKVRRPSHTMDDLMYAYIAGMDTLAWGLRIADKIVKDGCFDKFIEERYSSYNSGIGAK IESKSTSLEELYDYALALEEKELPSGNQELLEAKLNQFIYNL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 9e-111 | 55 |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 1e-110 | 55 |
