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Name : BPTD_3111 (BPTD_3111) Accession : YP_005591112.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Virulence Product : UDP-N-acetylglucosamine C4 epimerase Function : - COG functional category : - COG ID : - EC number : - Position : 3399388 - 3400413 bp Length : 1026 bp Strand : - Note : - DNA sequence : ATGACGAATCGCTTTGAGACCACGTGCGCGCAGTTGCGGGCCCAACCCCAGAAATGGCTGGTGACCGGCTGCGCCGGCTT CATCGGCTCGAACCTGCTCGAGACGTTGCTCGGGCTGGACCAGGCGGTGGTGGGGCTGGACAACTTCGCCACGGGACACC AGCACAACCTGGACGAGGTGCGCGCGGCGGTGACGCCCGAGCAATGGGCGCGCTTCACCTTCATCGAAGGCGACATCCGC GACCTGGCGGCCTGCCAGCGCGCCGTGCAGGGCGTGGACCGGGTGCTGCACCAGGCCGCGCTGGGTTCGGTGCCGCGTTC GCTGAAAGACCCGATCACGACCAACGAGGTCAACATCGGCGGTTTCCTGAACATGCTGGTGGCCGCGCGCGATGCGCAGG TCCAGGCGTTCGTCTATGCGGCCTCGAGCTCGACCTACGGCGACCATCCCGACCTGCCCAAGGTGGAGGAGCGCATCGGC AATCCGCTCTCGCCGTACGCGGTGACCAAGTACGTCAACGAGCTGTACGCCGACGTGTTCGCGCGCTCGTACGGGTTTTC CAGCGTGGGGCTGCGCTACTTCAACGTGTTCGGCAAGCGCCAGGACCCGGACGGCGCGTACGCGGCGGTGATTCCGAAGT GGACGGCGGCGATGATCAAGGGCGAGGACGTCGTGATCAACGGCGACGGCCAGACCAGCCGCGACTTCTGCTTCGTGGAG AACGCGGTGCAGGCCAACCTGCTGGCGGCGATGGCCGCACCGGAAGGCGCGAACCAGGTCTACAACGTGGCGTACAACGC GCGCACGACGCTGACCGAGCTGTTCGAGCACCTGCGGCGCACGCTGGCCGGGCAGGGCGTGTCGTACGAGAAGGCGCCGG TGTACGCGGAATTCCGCGCCGGCGACGTGCGCCACTCGCAGGCCGACATCGGCAAGGCCGGCAAGCTGCTGGGCTACGAG CCGGCCTACGACATCCTGCGCGGGCTGGAAGCCGCCATGCCCTGGTACACGCAATTCCTGCGTTGA Protein sequence : MTNRFETTCAQLRAQPQKWLVTGCAGFIGSNLLETLLGLDQAVVGLDNFATGHQHNLDEVRAAVTPEQWARFTFIEGDIR DLAACQRAVQGVDRVLHQAALGSVPRSLKDPITTNEVNIGGFLNMLVAARDAQVQAFVYAASSSTYGDHPDLPKVEERIG NPLSPYAVTKYVNELYADVFARSYGFSSVGLRYFNVFGKRQDPDGAYAAVIPKWTAAMIKGEDVVINGDGQTSRDFCFVE NAVQANLLAAMAAPEGANQVYNVAYNARTTLTELFEHLRRTLAGQGVSYEKAPVYAEFRAGDVRHSQADIGKAGKLLGYE PAYDILRGLEAAMPWYTQFLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tviC | NP_458739.1 | Vi polysaccharide biosynthesis protein, epimerase | Virulence | SPI-7 | Protein | 2e-98 | 63 |
| tviC | NP_807944.1 | VI polysaccharide biosynthesis epimerase | Virulence | SPI-7 | Protein | 2e-98 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BPTD_3111 | YP_005591112.1 | UDP-N-acetylglucosamine C4 epimerase | VFG0430 | Protein | 7e-99 | 63 |
