Gene Information

Name : hemC (BPTD_2497)
Accession : YP_005590553.1
Strain : Bordetella pertussis CS
Genome accession: NC_017223
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2712996 - 2713940 bp
Length : 945 bp
Strand : -
Note : -

DNA sequence :
GTGGCCGCTGTAGAACGCCTGACCATCGCCACGCGCGCCAGCCGGCTTGCCTTGTGGCAAGCCGAGCATGTGCGCGATCT
GCTGCGCGCGCGCTACCCGGCGTGCAGCGTCGAGTTGCTGACGCTGACCACGCGCGGCGACCAGATCCTGGACCGCACCC
TGTCCAAGGTGGGCGGCAAGGGCTTGTTCGTCAAGGAACTCGAAACCGCCTTGCTCGACGGCCGCGCCGATCTCGCGGTG
CATTCGCTCAAGGACGTGCCGGTGGACCTGCACGCGCCGTTCGAGCTGAGCTGCGTGCTCGAGCGCGCCGATCCGCGCGA
TGCGTTCGTCTCCAACGATTACGGCAGCCTGGCCGACCTGCCGCCCGGGGCGGCGGTCGGCACGTCCAGCCTGCGGCGCG
AGTCGCAGATCCGCGCCCGCTATCCGCACCTGGTCGTCAAGCCGCTGCGGGGCAATCTCGATACGCGCCTGGGCAAGCTG
GACAACGGCGATTACGCCGCCATCGTGCTGGCCGCGGCGGGCCTGGAGCGCCTGGGCCTGGCGGCCCGCATCCGCGCGCT
GCTGGAACCGGACGACAGCCTGCCCGCGGCCGGGCAGGGCGCGCTGGGCATCGAGATCCTGCAGGGCCGCGCCGATGTGC
GCGCCATGCTGGCGCCGCTGGGCGACGCCGCCACCCTGGCCTGCGTGACCGCCGAGCGCGCGGTCTCGCGCATGCTGGGC
GGATCGTGCCAGGTGCCGCTGGCGGCCTATGCCCGTATCGATGGCGATGAGCTCGCCTTGCGCGCGCTGGTCGCCGCGCC
CGACGGCCGCCGCATCGTGCGGGCCGAGCGCCGCGGTCCGCGCGACCAGGCCCAGGCCATCGGCGAGTCGGCCGCGCGCG
ACTTGCTGGCCGACGGCGCCGACGCAATACTGGCCGAATTGCTGCCAACCTCGCCCGCGCCTTGA

Protein sequence :
MAAVERLTIATRASRLALWQAEHVRDLLRARYPACSVELLTLTTRGDQILDRTLSKVGGKGLFVKELETALLDGRADLAV
HSLKDVPVDLHAPFELSCVLERADPRDAFVSNDYGSLADLPPGAAVGTSSLRRESQIRARYPHLVVKPLRGNLDTRLGKL
DNGDYAAIVLAAAGLERLGLAARIRALLEPDDSLPAAGQGALGIEILQGRADVRAMLAPLGDAATLACVTAERAVSRMLG
GSCQVPLAAYARIDGDELALRALVAAPDGRRIVRAERRGPRDQAQAIGESAARDLLADGADAILAELLPTSPAP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-56 54
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-56 54