|
Name : BPTD_2428 (BPTD_2428) Accession : YP_005590487.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 2637330 - 2638685 bp Length : 1356 bp Strand : - Note : - DNA sequence : ATGCTAGATCCGATACTGCTGCGCAAAGACCTGCAAACCGTCGTCGACCGCCTCAAGAGCCGTGGCGTCGATTTCGACAT CGCCCGGTTCAACGAGCTGGAGTCCCGCCGCAAGGCCGTCCAGACCGAAACCGAGTCGCAGCAGGCGCGCCGCAATGCCT TGGCCAAGCAGATCGGCCAGCTCAAGGGCAAAGGCGCACCCGAAGCGGAAGTGCAGGCCGTGATGGCCGAGTCGCAGGCC TTGCCGGCCCGGCTCAAGGCGCTCGAGGACGAACTGGCGCAGACGCAGGCGCAACTCAACGACCTGCTGATGTCCGTGCC CAACCTGCCGCACGCCAGCGTGCCGCAGGGCGCGTCCAGCGACGAGAACGTCGAGGTGCGGCGTTGGCTGCCGGGCGCGG CCGACGAGCGCGGCATCCCTGCGGCGCTGGGTTTCGAGGTGCGGGATCACGTGGCGGTGGGCGAGCCGCTGGGCCTGGAT TTCGATCTGGCCGCACGGCTGTCGGGCGCGCGCTTTTCTTTCATGCGCGGCCAGATGGCGCGCCTGCACCGCGCGCTGGC GCAGTTCATGCTGGACTTGCAGACGGGCACGCATGGCTACACCGAGTGCTACACGCCCTACATCGTCAACAGCTCGACCT TGTTCGGCACCGGCCAACTGCCCAAGTTCAAGGACGACATGTTCTTCGTCACCAAGGGCGGCGGCGACGACGAGCCCAAG GTCGACGAGCAGGGCAACCCGCTGGCGCGCGAAGACCAATACCTGATCTCGACCTCGGAAATCACCCTGACCAGCGTGGT GCGCGAGACCATCGTGGCCGGCGCCGACCTGCCGCTGCGCCTGACCGCGCATACGCCGTGCTTCCGCTCCGAAGCCGGCA GCGGCGGGCGCGATACGCGCGGCATGATCCGCCAGCACCAGTTCGACAAGGTCGAGATGGTGCAGATCGCCCATCCCGAG CATTCGTACGAGGCGCTCGAGGAAATGGTCGGCCATGCCGAGCGCGTACTGCAGCTGCTGGAGCTGCCGTACCGCGTCAT GCTGCTGTGCACCGGCGACATGGGTTTCGGCTCGGCCAAGACCTACGACCTGGAGGTCTGGCTGCCGGCGCAGGATACCT GGCGCGAGATCTCCTCGGTTTCCAACTGCGAAACATTCCAGGCGCGCCGCATGCAGGCCCGCTTCCGTAACGCGCAGAAC AAGCCCGAATACGTGCATACGCTCAATGGGTCCGGGCTGGCCGTGGGCCGCGCCCTGGTGGCCGTGCTGGAAAACTGCCA GCAAGCCGACGGCAGCGTGCGGGTGCCGGCCGTGCTGCAGCCCTACATGGGCGGCCTGACCGTTCTCGAACCTTGA Protein sequence : MLDPILLRKDLQTVVDRLKSRGVDFDIARFNELESRRKAVQTETESQQARRNALAKQIGQLKGKGAPEAEVQAVMAESQA LPARLKALEDELAQTQAQLNDLLMSVPNLPHASVPQGASSDENVEVRRWLPGAADERGIPAALGFEVRDHVAVGEPLGLD FDLAARLSGARFSFMRGQMARLHRALAQFMLDLQTGTHGYTECYTPYIVNSSTLFGTGQLPKFKDDMFFVTKGGGDDEPK VDEQGNPLAREDQYLISTSEITLTSVVRETIVAGADLPLRLTAHTPCFRSEAGSGGRDTRGMIRQHQFDKVEMVQIAHPE HSYEALEEMVGHAERVLQLLELPYRVMLLCTGDMGFGSAKTYDLEVWLPAQDTWREISSVSNCETFQARRMQARFRNAQN KPEYVHTLNGSGLAVGRALVAVLENCQQADGSVRVPAVLQPYMGGLTVLEP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-97 | 50 |
