Gene Information

Name : BPTD_2262 (BPTD_2262)
Accession : YP_005590331.1
Strain : Bordetella pertussis CS
Genome accession: NC_017223
Putative virulence/resistance : Virulence
Product : putative aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2451112 - 2452605 bp
Length : 1494 bp
Strand : +
Note : -

DNA sequence :
ATGAGCACCCTGCCCCCGCTGTCCCATTGGGAATCCCTCGCCGCCGGCCTGACGCTGCGCAACCAGGCCTTCATCGACGG
CCGCTGGCACGATGGCCAGGCCGGGCCGCTGGCCGCCATCAACCCGGCCACCGGCCAGTTGCTCGCCGAAGTGACGGCCT
GCTCGCAAGCCGATATCGACCAGGCCGTCGCGGCCGCGCGGCGCGCCTTCGAGTCCGGCGTGTGGTCGCGCATGCCGCGC
CGCGAGCGCAAGCAATGCATGCTGCGCCTGGCCGCGCTGATCCGCGAGCACGCCGAAGAACTGGCCCTGATCGAAACGCT
GAACATGGGCAAGCCTATCGGCGACACCATGGCCTTCGACATCCCGGAAACCGCGCATACCTACGCGTGGTATGCCGAGA
CCATCGACAAGCAGTACGACGAAATCGCCCCCACCGACGCCGACGCGCTGGCCACCATCACGCGCGAACCGCTGGGCGTG
GTGGCCGCCGTGGTGCCATGGAACTACCCGCTGCTGATGGCCTCGTGGAAGGTGGCGCCGGCGCTGGCCGCCGGCAACAG
CGTGATCCTCAAGCCGGCCGAGCAGTCCTCGCTGTCGGCCCTGCGGCTGGCCGAACTGGCGCTCCAGGCCGGCATCCCCG
CCGGCGTGCTCAACGTGGTGCCGGGCGCCGGCCCGGTGGCCGGGCGCGCGCTCGGACTGCACATGGACGTGGATTGCCTG
GCCTTCACCGGCTCGACCGCCACCGGCAAGCGCTTCATGGAGTATTCCGGGCAATCCAACCTCAAGCAGGTCTGGCTGGA
ATGCGGCGGCAAGTCGCCGCACATCATTTTCGACGACTGCCCCGACCTGGACCGCGCCGCCCTGGCGGCGGCCATCGGCA
TCTTCAACAACCAGGGCGAGGTCTGCATCGCGGGCTCGCGCCTGTATGTGCAGGCCGGCATCTACGACACCTTCGTCAGC
AAGGTGGAGGCGTGTGCGCGCGCGATGCAGCCGGGCAATCCGCTCGACCCGGCCTCGCCGATGGGCGCCATGGTCGATGA
GAGGCAGATGGCGCGCGTGCTGGAATATGTCGAAAGCGGCCGGCGCGAAGGCGCGCGGCTGCGCATGGGCGGCGAGCGCG
TGCGCGCCGACAGCGGCGGCTACTACATAGAACCCACCATCTTCGAATGCGCGCGGCCCGACCTGACCATCGTGCGCGAG
GAGATCTTCGGCCCCGTGCTGGCGGTCACCCGGTTCGACGGCGAAGACGAGGTGGTGGCGCAGGCCAATGCCTCCGCCTA
TGGCCTGGGATCGGGCCTGTGGACGGCCGACCTGTCGCGCGCCCATCGCGTCTCGCGCAGGCTGCGCGCCGGCCTGGTAT
GGGTGAACTGCTACTTCGACGGCGACGTGACGGTGCCGTTCGGCGGCGTCAAGCAATCCGGCTTCGGGCGCGACAAGTCG
CTGCACGCGCTGGACAAGTACACCTCGCTGAAGACGACCTGGATCCGCCTGTAG

Protein sequence :
MSTLPPLSHWESLAAGLTLRNQAFIDGRWHDGQAGPLAAINPATGQLLAEVTACSQADIDQAVAAARRAFESGVWSRMPR
RERKQCMLRLAALIREHAEELALIETLNMGKPIGDTMAFDIPETAHTYAWYAETIDKQYDEIAPTDADALATITREPLGV
VAAVVPWNYPLLMASWKVAPALAAGNSVILKPAEQSSLSALRLAELALQAGIPAGVLNVVPGAGPVAGRALGLHMDVDCL
AFTGSTATGKRFMEYSGQSNLKQVWLECGGKSPHIIFDDCPDLDRAALAAAIGIFNNQGEVCIAGSRLYVQAGIYDTFVS
KVEACARAMQPGNPLDPASPMGAMVDERQMARVLEYVESGRREGARLRMGGERVRADSGGYYIEPTIFECARPDLTIVRE
EIFGPVLAVTRFDGEDEVVAQANASAYGLGSGLWTADLSRAHRVSRRLRAGLVWVNCYFDGDVTVPFGGVKQSGFGRDKS
LHALDKYTSLKTTWIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 5e-115 55
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-72 42
hpaE AAO17179.1 HpaE Not tested tcd island Protein 3e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BPTD_2262 YP_005590331.1 putative aldehyde dehydrogenase VFG0082 Protein 3e-72 42