|
Name : acoD (BPTD_2123) Accession : YP_005590201.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : - COG ID : - EC number : - Position : 2302057 - 2303577 bp Length : 1521 bp Strand : - Note : - DNA sequence : ATGGATCTATCCGACCTGAAAAAATTGGGCCTGGATGTGGCCTACCCGTTCAAGGAACAGTACGAGAACTACATCGGCGG CCAATGGGTGGCTCCGGCAGGCGGGGAGTACTTCGACAATCTGTCGCCCATTACCGGCCAGCCGTTTTGCCGCGTGCCGC GCTCGGGCGCGGCCGACGTCGAACTGGCGCTGGACGCGGCGCATCGCGCGTGCGCCGCGTGGGCGCGCACCTCGCCCGCC GAGCGGGCCAACATCCTGCTGCGCATCGCCGACCGCATCGAGGGACAGTTGCCCATGCTGGCGGTGGCCGAGTCGATCGA CAACGGCAAGCCGCTGCGCGAGACCACCGCGGCCGACCTGCCGCTGGCGATCGACCATTTCCGCTATTTCGCGGGCTGCA TCCGGGCGCAGGAGGGCGCCATCTCGGAGATCGACGCCAACACCGTGGCCTACCACTTCCACGAACCCATCGGCGTGGTG GGGCAGATCATTCCCTGGAACTTCCCGCTGCTGATGGTGGCTTGGAAGCTGGCGCCGGCGCTGGCGGCGGGCTGCGTGGT GGTGCTCAAGCCGGCCGAACAGACGCCGGCCTCGATCCTGGTGCTGGCCGAACTGATCGGCGACCTGCTGCCGCCGGGCG TGCTCAACGTGGTCAACGGCTATGGCAAGGAGGCCGGCCAGGCGCTGGCCACCAGCAAGCGCATCGCCAAAATCGCCTTC ACCGGGTCGACGCCGGTGGGCAAGCACATCCTGCACGCGGCGGCCGACAACCTGATCCCCGCCACGGTGGAGCTGGGCGG CAAGAGCCCCAACATCTTCTTCGACGACGTGATGGACCACGACGACGAGTTCCTGGACAAGGCGCTCGAGGGCCTGGCCA TGTTCGCGCTCAACCAGGGCGAGGTCTGCACCTGCCCGTCGCGCATCCTGATCCAGGAGTCGATCTACGAGCGCTTCATC GAGAAGGCCATCGCGCGGGTGCAGTCCATCAAGACCGGCCATCCGCTCGATGCCGGCACCATGGTGGGCGCACAGGTCTC GCAGGTGCAGATGGACAAGATCCTGTCCTATATCGATATCGGCCGCCAGGAGGGCGCGCAATGCCTGACCGGCGGCGCGC GTAACGACATGCTGCCGGGCGGGCTGGACCAGGGTTTCTATGTCCAGCCGACCATGCTGCTGGGCAAGAACAGCATGCGC ATCTTCCAGGAGGAAATCTTCGGGCCGGTCGCGGCGGTGGCCACCTTCAAGGACGAGGAAGAGGCCATCGCCATGGCCAA CGACACGTTCTACGGCCTGGGCGCGGGCGTCTGGAGCCGCGACGGCGCGCGGGCCTACCGCGTGGGCCGCGGCATCGAGG CCGGCCGGGTGTGGACCAATTGCTATCACCTGTATCCGGCGCATGCCGCCTTCGGCGGCTACAAGCAGTCCGGCATCGGG CGCGAGGCGGCGCTGTCGAATTACCAGCAGACCAAGTGCCTGCTGGTGAGCTACAGCGCCAAGGCCCTGGGCTTCTTCTA A Protein sequence : MDLSDLKKLGLDVAYPFKEQYENYIGGQWVAPAGGEYFDNLSPITGQPFCRVPRSGAADVELALDAAHRACAAWARTSPA ERANILLRIADRIEGQLPMLAVAESIDNGKPLRETTAADLPLAIDHFRYFAGCIRAQEGAISEIDANTVAYHFHEPIGVV GQIIPWNFPLLMVAWKLAPALAAGCVVVLKPAEQTPASILVLAELIGDLLPPGVLNVVNGYGKEAGQALATSKRIAKIAF TGSTPVGKHILHAAADNLIPATVELGGKSPNIFFDDVMDHDDEFLDKALEGLAMFALNQGEVCTCPSRILIQESIYERFI EKAIARVQSIKTGHPLDAGTMVGAQVSQVQMDKILSYIDIGRQEGAQCLTGGARNDMLPGGLDQGFYVQPTMLLGKNSMR IFQEEIFGPVAAVATFKDEEEAIAMANDTFYGLGAGVWSRDGARAYRVGRGIEAGRVWTNCYHLYPAHAAFGGYKQSGIG REAALSNYQQTKCLLVSYSAKALGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-148 | 66 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-155 | 66 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-155 | 66 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-155 | 66 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-154 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| acoD | YP_005590201.1 | aldehyde dehydrogenase | VFG0082 | Protein | 1e-148 | 66 |
