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Name : BPTD_1956 (BPTD_1956) Accession : YP_005590053.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 2121583 - 2123259 bp Length : 1677 bp Strand : + Note : - DNA sequence : ATGACCGCGTCCGCGCCTTTGCTGCGCATCGAAGGGCTGGATGTCGACGTGGCCGGCGAGTCCGGCGTCACGCATGCCGT CAAGCGGCTGCAGCTGGCCGTGGCGCAGGGCGAGACCTTCGCCCTGGTCGGCGAGTCGGGCAGCGGCAAGAGCATGACCG CGCTGGCCCTGCTGCGGCTGCTGCCCGATGCCGGGCGCATCGTCGGCGGCCAGATCGAACTGGGCGGCACCGACCTCAAC GACCTGTCCGAGCGCGCCATGCGCGGCGTGCGCGGCGGCCGCATCGGCATCATCTTCCAGGAGCCCGCCACCAGCCTGAA TCCCGTGATGCGGGTGGGCGACCAGATCGTCGAGACCCTGGCCGCCCATACGCCCTTGCGCGGCGCGGCGGCGCGCGAGC GGGCCATCGACTGGCTGCGGCGCGTCGGCATCCCCGAGCCCGAGCGGCGCATCGACGACTATCCCTTCCAGTTCTCGGGC GGCCAGAAGCAGCGCCTGATGATCGCCATCGCGCTGGCGGCCGAGCCCAAGCTGCTGATCGCCGACGAGCCCACCACGGC GCTCGACGTCACCGTGCAGGCCCAGGTGCTGGAGCTGCTGGCCGGCATCCAGCGCGAGATGGGCATGGCGGTGCTGCTGA TCACGCACGACCTGGCGGTGGTGCGCAACGTGGCGCATCACGTGGCCCTGATGCGCGGCGGCGAGATCGTCGAAAGCGCC GATGCGCGCACGTTCTTCGAGCGGCCGCGCCATCCCTATGCGCGCGAACTGTTCGAGGCCATTCCCACCTTCGCCAAGCG CGGCCGGCCGCTCTCGGCCCAGGGCCGCGCGGCGGACCAGGGCAAGGCCGCGCCCGAGGCCGGCGCGGTGGTCCTGGATG TGCAGGACCTGCTGGTGCACTATCCGGTGCGCAAGGGCGTGCTGCGCCGCGTGGCCGCGTGGGTCGAGGCCGTCAACGGC GTCACCTTCACCCTGCGCGCCGGCGAGACCCTGGCGCTGCTGGGCGAATCGGGTTGCGGCAAGACCACCACCGGCAAGGC CTTGCTGCGCCTGGTCGAAGGCGCGCGCGTGCAGGGGCGCGCCATGCTCGATGGGCATGATCTGCTGGGCGCGTCGCGGC GCGAGCTGCGGCGGCTGCGGCAGGACATCCAGATCGTGTTCCAGGATCCCTTCGCGTCGCTCGACCCGCGCATGCGGGTC GGCGATATCCTCGAAGAGGGCATTGCCTCGCTGCGCCCCGAACTGGCCGCTTCGGCGCGCAGGGCGCGGGCCGTGGGCCT GCTGGAGCGGGTGGGGCTGCCGGCCGACACGCCCACGCGCTATCCGCACGAATTCTCGGGCGGCCAGCGCCAGCGCATCG CCATCGCGCGGGCGCTGGCGGTCGAACCGAAGGTGCTGATCTGCGACGAACCCACTTCGGCGCTGGACGTGTCGGTGCAG GCGCAGATCCTCGATCTGCTGCGCGACCTCCAGGCCGAGCTGGGCATCGCCTACCTGTTCATCACGCACAACTTCGGCGT GGTCGAATACCTGGCCGACCGCATCGCGGTCATGCACGGCGGACGCATCGTCGAGATGGGGCCCGCCGATACCGTGCTGC ACGCGCCGCGCCACGAGATGACGCAGCGCCTGCTGGCCGCCGTGCCGCGGCTGCGGTTCGGGGCGGAGAACGAGTAG Protein sequence : MTASAPLLRIEGLDVDVAGESGVTHAVKRLQLAVAQGETFALVGESGSGKSMTALALLRLLPDAGRIVGGQIELGGTDLN DLSERAMRGVRGGRIGIIFQEPATSLNPVMRVGDQIVETLAAHTPLRGAAARERAIDWLRRVGIPEPERRIDDYPFQFSG GQKQRLMIAIALAAEPKLLIADEPTTALDVTVQAQVLELLAGIQREMGMAVLLITHDLAVVRNVAHHVALMRGGEIVESA DARTFFERPRHPYARELFEAIPTFAKRGRPLSAQGRAADQGKAAPEAGAVVLDVQDLLVHYPVRKGVLRRVAAWVEAVNG VTFTLRAGETLALLGESGCGKTTTGKALLRLVEGARVQGRAMLDGHDLLGASRRELRRLRQDIQIVFQDPFASLDPRMRV GDILEEGIASLRPELAASARRARAVGLLERVGLPADTPTRYPHEFSGGQRQRIAIARALAVEPKVLICDEPTSALDVSVQ AQILDLLRDLQAELGIAYLFITHNFGVVEYLADRIAVMHGGRIVEMGPADTVLHAPRHEMTQRLLAAVPRLRFGAENE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 6e-89 | 43 |
