Gene Information

Name : lspA (BPTD_1729)
Accession : YP_005589858.1
Strain : Bordetella pertussis CS
Genome accession: NC_017223
Putative virulence/resistance : Unknown
Product : lipoprotein signal peptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1861729 - 1862235 bp
Length : 507 bp
Strand : -
Note : -

DNA sequence : 
ATGACGCAGGCCCGCGCCGCCGCGCCGCGACTGGCCCCCTGGCTGGCCGCGGCCGCCCTCATCATCGTGCTGGACCAGGC
GACCAAGCTGTACTTCGACGGCGCCTTCCAGTACGGCGAACGCCTCAACGTACTGCCGTTCTTCGACTTCACGCTGCTGT
ACAACCGGGGCGCGGTATTCAGCTTTCTCGCTTCCGAGGAAGGCTGGCAACGCTGGTTCTTCACCGCGCTGGGCGTGGGC
GCCTCGATCGTCATCGTCTGGCTGCTGCGCCGCACCGCCGGCCAGCCGCGCTTCAGCCTGGCCCTGACGCTGATCATGGG
CGGCGCGCTGGGCAATGTGATCGACCGCGTGGCCTACGGCCATGTCGTGGACTTCCTGCTGTTCTACTGGCGCGACTGGC
ACTATCCCGCATTCAACCTGGCCGACGTGGCCATCACCTGCGGCGCCGTGCTGCTGGTCGTCGACGAGCTGCTGCGGGCG
CGCAAGCGGCCGACCGCGCAGGACTGA

Protein sequence : 
MTQARAAAPRLAPWLAAAALIIVLDQATKLYFDGAFQYGERLNVLPFFDFTLLYNRGAVFSFLASEEGWQRWFFTALGVG
ASIVIVWLLRRTAGQPRFSLALTLIMGGALGNVIDRVAYGHVVDFLLFYWRDWHYPAFNLADVAITCGAVLLVVDELLRA
RKRPTAQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
lspA ADI24143.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-18 49
lspA CAJ77023.1 lipoprotein signal peptidase Not tested AbaR1 Protein 5e-18 49
lspA ACS32043.1 lipoprotein signal peptidase Not tested AbaR5 Protein 8e-18 49
lspA CAJ77096.1 Lipoprotein signal poeptidase Not tested AbaR1 Protein 9e-21 46
lspA ADZ05771.1 lipoprotein signal peptidase Not tested AbaR11 Protein 9e-21 46
lspA AGK36655.1 lipoprotein signal peptidase Not tested AbaR26 Protein 9e-21 46
ACICU_00236 YP_001844895.1 lipoprotein signal peptidase Not tested AbaR20 Protein 1e-20 46
lspA ACN81031.1 lipoprotein signal peptidase Not tested AbaR5 Protein 1e-20 46
lspA AAN62189.1 putative lipoprotein signal peptidase LspA Not tested PAGI-2(C) Protein 2e-22 43