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Name : lysS (BPTD_1094) Accession : YP_005589281.1 Strain : Bordetella pertussis CS Genome accession: NC_017223 Putative virulence/resistance : Virulence Product : lysyl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 1174953 - 1176473 bp Length : 1521 bp Strand : - Note : - DNA sequence : ATGACCGACCAATCGCCCGCCCCGACCGCCCAGGATGAAAACCGCTTGATCGCCGAACGGCGCGCCAAGCTGGCCAGACT GCGTGAAACCGGCGTTGCGTTCCCCAACAATTTCGTGCCCGATGCGCACGCCGCCGACCTGCACGCCAGGTACGACGGCC TGGACCAGGAGGCGCTGACGGCCGCGGCGGTCACGGTCAAGGTGGCCGGCCGCATGATGCTCAAGCGCGTCATGGGCAAG GCCAGCTTCGCCACGCTGCAGGACGGCAGCGGCCGCATCCAGATCTACCTCGAGCGCGGCACGCTCGGCGAAGAGGCCTA CGCCGCTTTCAAGCAATGGGACATCGGCGACATCATCGCCATCGAGGGGCCGGTCTTCAAGACCAACAAGGGCGAGCTGT CGGTGCACGCCAACTCGGCGCGCCTGCTGTCGAAGTCGCTGCGTCCGCTGCCCGACAAGTTCCATGGCGTGGCCGACCAG GAGCTGCGCTACCGCCAGCGCTACGTCGACCTCATCATGACCGACGCCACCCGCCGCACCTTCGAGGCGCGCAGCAAGGC CGTCGGCGGCATCCGCCAGGCCATGCTCAATGCGGGCTTTCTCGAAGTCGAGACGCCGATGCTGCACCCGATTCCCGGTG GCGCGGCGGCCAAGCCCTTCGTGACCCACCACAATGCGCTGGACATGCAGATGTTCCTGCGCATCGCGCCCGAGCTTTAC CTCAAGCGCCTGATCGTCGGCGGCTTCGAGCGCGTGTTCGAAATCAACCGCAACTTCCGCAACGAGGGGGTGAGCCCGCG CCACAACCCCGAGTTCACCATGATGGAGTTCTACGCCGCGTACGCCGACTATCGCTGGCTGATGGACTTCACCGAGGACC TGATCCGCCAGGCCGCGATCGCGGCCACCGGCAGCGCCGTGCTCAGCTACCAGGACCGCGAGCTGGACCTGTCCCAGCCG TTCGACCGCCTGACGATCTGCGAAGCCATCCTGAAGTACGCCGAGGGCTATACCCAGGCGCAGCTCGACGACCCCGCGTT CGTGCGCGCCGAGCTCAGGAAACTGGGAGCCAACGTCGAGGGTCCGCCGCTGGCGCGCGCCGGCCTGGGCGCGCTGCAAC TGGCGCTGTTCGAGGAAACCGCCGAAGCCAAGCTGTGGCGCCCCACCTACATCATCGACTACCCGGTCGAGGTCTCGCCC CTGGCGCGCGCCTCCGACACCCGCGACGGCATTACCGAGCGCTTCGAACTGTTCATCACCGGACGCGAAATCGCCAACGG CTTCTCCGAGCTCAACGACCCTGAAGACCAGGCCGAGCGTTTCCGCGCCCAGGTCGAGGCCAAGGACGCCGGCGACGAAG AAGCCATGTACTTCGACGCCGACTACATCCGCGCGCTCGAATACGGCATGCCCCCCACCGGCGGCTGCGGCATCGGCATC GACCGCCTGGTCATGCTGCTGACCGACAGCCCCAGCATCCGCGACGTCATCCTCTTCCCGCACCTGCGCCGGGAAGACTG A Protein sequence : MTDQSPAPTAQDENRLIAERRAKLARLRETGVAFPNNFVPDAHAADLHARYDGLDQEALTAAAVTVKVAGRMMLKRVMGK ASFATLQDGSGRIQIYLERGTLGEEAYAAFKQWDIGDIIAIEGPVFKTNKGELSVHANSARLLSKSLRPLPDKFHGVADQ ELRYRQRYVDLIMTDATRRTFEARSKAVGGIRQAMLNAGFLEVETPMLHPIPGGAAAKPFVTHHNALDMQMFLRIAPELY LKRLIVGGFERVFEINRNFRNEGVSPRHNPEFTMMEFYAAYADYRWLMDFTEDLIRQAAIAATGSAVLSYQDRELDLSQP FDRLTICEAILKYAEGYTQAQLDDPAFVRAELRKLGANVEGPPLARAGLGALQLALFEETAEAKLWRPTYIIDYPVEVSP LARASDTRDGITERFELFITGREIANGFSELNDPEDQAERFRAQVEAKDAGDEEAMYFDADYIRALEYGMPPTGGCGIGI DRLVMLLTDSPSIRDVILFPHLRRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66193.1 | putative lysil-tRNA synthetase LysU | Not tested | PAI III 536 | Protein | 1e-129 | 58 |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 2e-75 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lysS | YP_005589281.1 | lysyl-tRNA synthetase | VFG1668 | Protein | 7e-130 | 58 |
