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Name : BLIJ_0715 (BLIJ_0715) Accession : YP_005584477.1 Strain : Bifidobacterium longum JCM 1222 Genome accession: NC_017219 Putative virulence/resistance : Virulence Product : Clp protease Function : - COG functional category : - COG ID : - EC number : - Position : 804633 - 807218 bp Length : 2586 bp Strand : + Note : - DNA sequence : ATGTTCGAACGGTTTACCGACCGTGCACGGCGCGTGATCGTGTTGGCGCAGGAAGAGGCGAGGGCCCTTCAGCACAACTA CATTGGCACCGAACACCTGCTGCTCGGCCTGATCCGCGAAGGTGAGGGCGTGGCCGCCAAGGCGCTCGCCTCGAAGGGCG TGGAGCTGGATGCCACCCGCAAGCAGGTCGAAGAGATGATCGGCAAGGGCAACGCGGCGCCGAACGGGCACATCCCCTTT ACCCCGCACGCCAAGCAGGTGCTGGAGTTTTCGCTGCGTGAAGCCCTGCAGCTGGGCCACAGCTACATCGGCACCGAGCA CATCCTGCTCGGATTGATCCGCGAAGGTGAGGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTGGGCGAAT TGCGCAGCGCGACCATCGATATGATCCGCGGCAACTCCGGCACTGGCGACGGCAAGGGCGAACTGGCCAATGCCGGCGGC GTGGCGGACAAGCAGAACAAGTCCGGTTCCGCCATCCTCGACCAATTCGGACGCAACCTGACCGCCGAAGCCGCCGAAGG CAAGCTGGACCCGGTCATCGGCCGTACCAACGAGATCGAACGCGTCATGGTCGTGCTTTCCCGACGCACCAAGAACAATC CGGTGCTGATCGGCGAACCGGGAGTGGGCAAGACCGCCGTGGTCGAAGGCTTGGCCCAGAAAATCCAAGCCGGCGACGTG CCGGAAACCCTGAAGGGCAAGCAGGTCTACTCGCTGGACCTCGGTTCCATGGTGGCCGGCTCCCGCTACCGTGGTGATTT CGAGGAGCGCCTGAAGAAGGTGCTGAAGGAGATCAAGACCCGCGGCGACATCGTGCTGTTCATCGACGAGATTCACACCA TCGTGGGCGCCGGCTCGGCCGACGGCGCGCTGGGTGCCTCCGACATGTTGAAGCCGATGCTGGCCCGTGGCGAGCTCCAG ACCATCGGTGCCACTACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCGGCTCTGGAACGTCGATTCCAGCCGAT TCAGGTGCACGAGCCGACCATCGCCGAGACCATCGAGATCCTGAAGGGCCTGCGTTCCCGTTACGAGAACCACCACCACG TGACCATCACCGATGGCGCGCTGCAGTCCGCCGCAGAGCTGTCCAGCCGGTACATCCAGGACCGTAACCTGCCTGACAAG GCCATCGACCTGATCGATGAGGCCGGTGCACGCCTGCGCATCAAGCGCCTGACCGCCCCGCCTGAGCTCAAGGAACTCGA CGAGAAGATCGCCAAGATCGCCGCCGACAAGGACGAGGCCATCAAGGGCCAGGACTTCGAGAAGGCCGCCGAACTGCGCG ACAAGCAGGAGAAGCTGGAAGCCGATCGCAAGCAGAAGGAAGACTCCTGGCGCGAAGGCGAGTCCGACGTCAAGATGGTT GTGGACGAGGACGTGATCGCCGAGGTCATCAGTTCCACCACCGGTATCCCGGTGTTCAAGCTGACCCAGGCCGAGTCCAA GAAACTGCTCAGCATGGAGACGGAGCTGCACAAGCGCATCATCGGTCAGGATGAAGCGGTTTCCGCTTTGTCACGGTCCA TCCGACGCACCCGCGTGGGATTGAAGGACCCGAAGCGCCCGTCCGGCTCGTTCATCTTCGCCGGCCCCACCGGCGTCGGC AAGACCGAGCTGGCCAAGACGCTCGCCGAGTTCCTGTTCGACGATGAGGACGCGCTGATTCGCGTGGACATGTCCGAGTT CTCCGAGAAGTACGCGGCTTCGCGACTCTTCGGCGCGCCTCCGGGATACGTCGGCTACGAGGAGGGCGGCGAGCTCACCG AAAAGGTGCGCCGCAAGCCGTTCTCCGTGGTGCTGTTCGACGAGATCGAAAAGGCTCATCCGGACATCTTCAACACGCTG CTGCAGGTGCTCGATGACGGCCACCTGACCGACGGTCAGGGCCGCAAGGTGGACTTCAAGAACACCATCATCATCCTGAC CACCAACCTCGGTACGCGAGACATCGCCAAGGCCGCCAACACGGGCTTCAACCTGGGTGCCAACAACGAGTCCAGCTACC AGCGCATGAAGGACCAGGTCAGCTCCGAATTGAAGCAGCAGTTCCGCCCGGAGTTCCTGAACCGTCTGGACGACATCATC GTCTTCAAGCAGCTCACCGAGCCGCAGGTGCGCCAGATCGTGGATCTGGATGTCAAGCAGCTCAACGACCGCCTGTTCGA CCGTCATATGTCGCTCGAACTCACCGACGCCGCCAAGGACCTGCTCGCGCAGAAGGGCTTCGACCCGCTGCTCGGTGCCC GTCCGCTGCGCCGCGTGATTCAGCGTGACATTGAGGACGCCATCTCCGAGAAGATCCTGATGGGAGATCTCGAGGACGGT CAGCGCGTGATGGTGGATGCGGAAGGCGAGGGTATCCTTGGCGAATTCACCTTCAAGGGTGAGAAGTTCGAGGAGCCGGC CGTCGCCGATAAGCCCGCCGAAGCCGGTGCCGCCAACGATGCCGAAACTTCGTCCGAAGCCGCACCCGTGCACGCTGACG ATTCTGGCGACGCTGCGCAGGAGTAG Protein sequence : MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGEGVAAKALASKGVELDATRKQVEEMIGKGNAAPNGHIPF TPHAKQVLEFSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLGELRSATIDMIRGNSGTGDGKGELANAGG VADKQNKSGSAILDQFGRNLTAEAAEGKLDPVIGRTNEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIQAGDV PETLKGKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGELQ TIGATTTDEYRKYIEKDAALERRFQPIQVHEPTIAETIEILKGLRSRYENHHHVTITDGALQSAAELSSRYIQDRNLPDK AIDLIDEAGARLRIKRLTAPPELKELDEKIAKIAADKDEAIKGQDFEKAAELRDKQEKLEADRKQKEDSWREGESDVKMV VDEDVIAEVISSTTGIPVFKLTQAESKKLLSMETELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPSGSFIFAGPTGVG KTELAKTLAEFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNTL LQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKAANTGFNLGANNESSYQRMKDQVSSELKQQFRPEFLNRLDDII VFKQLTEPQVRQIVDLDVKQLNDRLFDRHMSLELTDAAKDLLAQKGFDPLLGARPLRRVIQRDIEDAISEKILMGDLEDG QRVMVDAEGEGILGEFTFKGEKFEEPAVADKPAEAGAANDAETSSEAAPVHADDSGDAAQE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 67 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BLIJ_0715 | YP_005584477.1 | Clp protease | VFG0079 | Protein | 0.0 | 57 |
| BLIJ_0715 | YP_005584477.1 | Clp protease | VFG0080 | Protein | 7e-136 | 50 |
