Gene Information

Name : BLIJ_0475 (BLIJ_0475)
Accession : YP_005584239.1
Strain : Bifidobacterium longum JCM 1222
Genome accession: NC_017219
Putative virulence/resistance : Resistance
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 537178 - 537981 bp
Length : 804 bp
Strand : -
Note : -

DNA sequence :
ATGAAAAAACAACCAAATGACTTCATTGGGGTAAATACATATTTATCGGTTCAGGCGCGTGGGTTGGTCAAGCGTGTGGT
TTCCGCTGATGGTTCCAGTCCGAGTGTGATTCTCAATGATGTCTCGTTGGATATTCCCGGTGCCGGGTTGACAGCGATCG
TCGGGCCTTCGGGTGCGGGTAAGACCTCTTTGTTGTACGTGTTGTCCGGTTTGGACAGGCCCGACTCGGGTCGGGTCGTC
ATCGGCGGCACCGACATCTACGCGTTGGACGAGGAGCGTCGTTCGCGGTTCATCCGCGGGCATATCGGTTTCGTGTTCCA
GCAGTACAACCTCGTGCCGTATCTGACGGTCGAGGAGAACGTGATGCTGCCGCTCTCGCTCGCCCATCGCAAGGCCGACT
ACATTCGGGTCACGCAGCTGTTGTCCCGGTTCGGCCTGCGCCGGAGGGCGAGGACCGTGGTGAGCGCCCTGTCCGGCGGC
GAGCAGCAGCGCGTGGCCCTGTGCCGGGCCCTGCTCTTGCGCCCGGCGGTGGTGTTCGCCGACGAGCCCACCGGCGCGCT
CGACACCGCGAACAGCGAGCTCGTGCTGCAGGTGCTGCGCGAGCTGGCGGATTCGGGTTCCAACGTGGTCATGGTCACGC
ATGACACGGACGCCGCCGCCCTGGCCGACCGCGTGGTCTTCCTGCGTGACGGCGGAATCACCCACATCGCGGGCAGACTG
ACCGCTGGGCAGATCGTCGAGGGCATGCGCCGCACGTTCGAGCCGGCCATGCCGCAGCACGGTCAGGAGGCCCGTCGTGG
GTAG

Protein sequence :
MKKQPNDFIGVNTYLSVQARGLVKRVVSADGSSPSVILNDVSLDIPGAGLTAIVGPSGAGKTSLLYVLSGLDRPDSGRVV
IGGTDIYALDEERRSRFIRGHIGFVFQQYNLVPYLTVEENVMLPLSLAHRKADYIRVTQLLSRFGLRRRARTVVSALSGG
EQQRVALCRALLLRPAVVFADEPTGALDTANSELVLQVLRELADSGSNVVMVTHDTDAAALADRVVFLRDGGITHIAGRL
TAGQIVEGMRRTFEPAMPQHGQEARRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-30 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-32 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLIJ_0475 YP_005584239.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-29 43
BLIJ_0475 YP_005584239.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-35 42
BLIJ_0475 YP_005584239.1 putative ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-25 42