Gene Information

Name : HMPREF9228_0863 (HMPREF9228_0863)
Accession : YP_005582716.1
Strain : Bifidobacterium breve ACS-071-V-Sch8b
Genome accession: NC_017218
Putative virulence/resistance : Unknown
Product : DNA-binding helix-turn-helix protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 999743 - 1001278 bp
Length : 1536 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGTATCGGCGTTTGCGGAACGACTGCGCAATGCGATGAACAGTAGGGAATTGAAGCAGGTAGATCTGGTGCACGC
CGCCGAACGCCGCGGTGTCAAGATGGGCAAAAGCCATATCAGCCAATATGTTGCGGGCAAGACCATGCCGCGAGAGGATG
TGCTGCTGTTTCTGGCTGACGAACTTGATGTCGATGCGAACTGGCTTCGTGGCCGATCCTCGGAAACAAAATTGAACTCC
GACGCACAACCCGCTTCCCATATTGACACACCGAGCGGAGCTCCCACGTCGGCGGAAACGGAAATTCCTGCTGCTCGCCG
CCGTACCTTTGGCAAATCACACAAGCTTGATGACGTACTCTACGATGTTCGCGGCCCAGTGGTTGATGAGGCGGCCCGCA
TGGAACAGGCCGGCACCCACGTACTGAAGCTCAACATTGGCAACCCTGCACCGTTCGGCTTCCGTACGCCGGACGAGGTC
GTCTACGACATGGCGCAACAATTGCCTGAAACCGAAGGCTATTCGGCTTCCAAGGGCCTGTTCTCCGCGCGTAAGGCCAT
CATGCAGTATGCACAGCTCAAGAACATTCCGAACGTCACCATCGAAGACATATACACCGGCAATGGTGTCAGCGAGCTCA
TCAACCTGTCTATGTCCGCGCTGCTCGACAGTGGCGATGAAGTGCTTGTGCCATCTCCGGATTACCCGCTGTGGACCGCC
TGTGTGAATCTCGCCGGCGGCACCGCCGTGCATTACCTGTGCGACGAGAAGTCCGACTGGTACCCGGATATCGACGATAT
GCGTAAGAAGATCACCGATCGTACCGTGGCCATCGTGCTCATCAATCCGAACAATCCGACCGGTGCGCTGTATCCAAAGG
AAGTGCTGCAGCAGATTGTCGACTTGGCGCGTGAGCACCAGCTCATGATTTTCTCCGACGAAATCTACGATCGTCTGGTT
ATGGACGGGCTCGAGCATATCTCCATCGCTTCCATGGCTCCGGATCTGTTCTGCGTGACCTTCTCCGGCCTGTCCAAGTC
GCATATGATCGCCGGCTACCGCGTGGGCTGGATGATTTTGTCGGGCAACAAGGCCATCGCCAAGGATTACATCGAGGGCA
TCAATATGCTCACCAACATGCGCATCTGTTCGAACGTGCCCGCGCAGTCCATTGTGCAGACCGCGCTGGGCGGCCATCAG
AGCGTGCACGACTATATCGTGCCCGGTGGCCGTATCCATGACCAACGTGATTACATCTATGACGCGTTGAACTCCATTCC
GGGCATCACCGCGGTCAAGCCGAAGGCCGCGTTCTATATCTTCCCGAAGATTGATATCAAGAAGTTCAACGTACATGACG
ACGAGCAGTTCGCCCTCGATCTGCTGCATGACAAGCGCATTCTCATCACGCGCGGCGGCGGCTTCAACTGGCACGAGCCG
GATCACTTCCGTATCGTCTACCTGCCACGCATCGAAGTGCTCAAGGATGCCACCAACAAGCTCTCCGACTTCCTCAGCTA
CTACTGGCAGAGCTGA

Protein sequence :
MSVSAFAERLRNAMNSRELKQVDLVHAAERRGVKMGKSHISQYVAGKTMPREDVLLFLADELDVDANWLRGRSSETKLNS
DAQPASHIDTPSGAPTSAETEIPAARRRTFGKSHKLDDVLYDVRGPVVDEAARMEQAGTHVLKLNIGNPAPFGFRTPDEV
VYDMAQQLPETEGYSASKGLFSARKAIMQYAQLKNIPNVTIEDIYTGNGVSELINLSMSALLDSGDEVLVPSPDYPLWTA
CVNLAGGTAVHYLCDEKSDWYPDIDDMRKKITDRTVAIVLINPNNPTGALYPKEVLQQIVDLAREHQLMIFSDEIYDRLV
MDGLEHISIASMAPDLFCVTFSGLSKSHMIAGYRVGWMILSGNKAIAKDYIEGINMLTNMRICSNVPAQSIVQTALGGHQ
SVHDYIVPGGRIHDQRDYIYDALNSIPGITAVKPKAAFYIFPKIDIKKFNVHDDEQFALDLLHDKRILITRGGGFNWHEP
DHFRIVYLPRIEVLKDATNKLSDFLSYYWQS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 55
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 55
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 2e-118 55
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 2e-118 55