Gene Information

Name : HMPREF9228_0667 (HMPREF9228_0667)
Accession : YP_005582544.1
Strain : Bifidobacterium breve ACS-071-V-Sch8b
Genome accession: NC_017218
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 790644 - 791456 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGGCACGGCACAGCGCAAAAGGCGTCGCACAAAGCATCGAACAGGCCGAGGAACAGCACGACCATGTGGTGGCGCGGGC
CGTAGATCTGACGAAAACCTACGGTGACGCCGACAGCCAGGTAGTGGCGCTGGATCATGTGAACGTGGAATTCCAGCGCG
GCCAGATGACCGCAATCATGGGCCCGTCCGGCTCAGGCAAGTCCACGCTGATGCATTGCATGGCGGGACTCGACCAACCG
ACTTCCGGCAAGGTGTTTATCGAAGGCCTCGAAGTGTCTTCGATGGGCCAGAAGCAGCTCACCGACTTGAGACGTGCGCA
GATAGGATTCATCTTCCAGTCGTTCAATCTGGTACCCACGCTCTGCGCTGAAGAGAACATCCTGCTGCCTTTGCAAATTG
CGAAGAAGCCGATTGACCGCGATTGGTTCAAGCAGGTGGTCAAGGTGGTCGGGCTGGAGAAGCGACTCACCCACCGGCCA
AGCCAGCTGTCCGGCGGACAGCAGCAGCGCGTGGCCTGCGCCCGTGCGATGATGGCCCGCCCGTCCGTGATTTTCGCCGA
TGAGCCCACCGGTAACCTCGATTCTCGTTCTTCACGTGAGGTATTGGGCTTCCTGAAGCAGTCTGTGACCGAATATGGCC
AGTCCATTGTGATGGTGACGCATGATCCGCGCGCCGCCTCCTACGCTGACCGCGTGCTGGTTTTGGCCGATGGCCATATT
ACGCAGGATCTCGACCACCCTACCTATGAGCAGATTCTTGAGGTCTTTGCCGATGACGGTGCGGATGAGGCCGGCAAGGT
GGCACAAGCATGA

Protein sequence : 
MARHSAKGVAQSIEQAEEQHDHVVARAVDLTKTYGDADSQVVALDHVNVEFQRGQMTAIMGPSGSGKSTLMHCMAGLDQP
TSGKVFIEGLEVSSMGQKQLTDLRRAQIGFIFQSFNLVPTLCAEENILLPLQIAKKPIDRDWFKQVVKVVGLEKRLTHRP
SQLSGGQQQRVACARAMMARPSVIFADEPTGNLDSRSSREVLGFLKQSVTEYGQSIVMVTHDPRAASYADRVLVLADGHI
TQDLDHPTYEQILEVFADDGADEAGKVAQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 43
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9228_0667 YP_005582544.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-46 49
HMPREF9228_0667 YP_005582544.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-51 47
HMPREF9228_0667 YP_005582544.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 7e-41 46
HMPREF9228_0667 YP_005582544.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 5e-37 45