Gene Information

Name : HMPREF9228_0659 (HMPREF9228_0659)
Accession : YP_005582536.1
Strain : Bifidobacterium breve ACS-071-V-Sch8b
Genome accession: NC_017218
Putative virulence/resistance : Virulence
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 780865 - 781626 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence :
ATGACTTCTCCCGTTCTTTCTTCTCTCCCGCAATCTTCCCCATGCGCGCTGGAATTACACGACGTCACTCACGTTCACGG
CAAAGATGCACGTCGTGTCACCGCGCTCAGTCACGCCAATCTCACGCTTCGCCCGGGTGAATTCGTGGCCATCATGGGCC
CCAGTGGTTCCGGCAAATCCACTTTGCTCAATCTTGCGGGCGGGCTCGATGTGCCCACGCAGGGGCACGTGCTGGTCGAA
GGCCGCGATCTGGCCACACTGTCAGTGGCCGAACGCGCGGCCATCCGCCGCAAATCGATAGGCTACGTGTTTCAGGATTT
CAATCTGCTGCCTTCCCTGAGCGCAGCCGAGAACGTGTCGTTCCCCTTGGAATTGGATGGCTGGAATCCCCGCAAGGCAC
GTGAGGCCGCGATGCAATCCCTCAATGAAGTGGGGGTAGCCGATATGGCTGATCGCCGACCTGAAGACATGTCTGGCGGC
CAGGCGCAACGTGTGGCGATTGCCCGCGCACTGGTCGGCCCACGCCGTCTACTACTGGCCGACGAGCCGACCGGAGCTCT
GGATTCCAATGCCGGCATGACGATTCTCGAAGTGTTGCGCACCCGCGCAGATCGCGGCGCGGCCGTACTGCTGGTCACTC
ATGAGCCTCGCTTCGCCGCCTGGGCCGACCGCACGGTGTTTTTGAAGGACGGCCGTATCATCGATGAAACCGGCTCCAGC
AATATGGATGATTTGCTCAACCTTGAGGAAAGGGGAGCATGA

Protein sequence :
MTSPVLSSLPQSSPCALELHDVTHVHGKDARRVTALSHANLTLRPGEFVAIMGPSGSGKSTLLNLAGGLDVPTQGHVLVE
GRDLATLSVAERAAIRRKSIGYVFQDFNLLPSLSAAENVSFPLELDGWNPRKAREAAMQSLNEVGVADMADRRPEDMSGG
QAQRVAIARALVGPRRLLLADEPTGALDSNAGMTILEVLRTRADRGAAVLLVTHEPRFAAWADRTVFLKDGRIIDETGSS
NMDDLLNLEERGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-33 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-35 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-35 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9228_0659 YP_005582536.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 6e-39 46
HMPREF9228_0659 YP_005582536.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 5e-40 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HMPREF9228_0659 YP_005582536.1 ABC transporter ATP-binding protein VFG2059 Protein 1e-18 42