Gene Information

Name : HMPREF9228_1987 (HMPREF9228_1987)
Accession : YP_005583732.1
Strain : Bifidobacterium breve ACS-071-V-Sch8b
Genome accession: NC_017218
Putative virulence/resistance : Virulence
Product : PTS system sugar-specific permease protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2283949 - 2285328 bp
Length : 1380 bp
Strand : -
Note : -

DNA sequence :
ATGAACGGCGTGTTATCGGTGCTACTTGATATTTTCCGGCAGCCATCCATTATTGTGGCTTTGATTTCGTTGGTGGGTCT
TGCCGTGCAGCGCAAGAAGGCTACCGACATTATGAAGGGCACCATCCGAACCATGGTGGGATTCCTGGTGTTGGCAGCAG
GCGCTTCCGTCGTTTCCGGCGCACTTGATCCCTTTGGCAGCATGTTCCAGCATGCATTCAATGTGCAGGGTGTGGTGCCG
AACAACGAAGCCATTGTCGGCACGGTCTTGGTGAAGTATGGGTCTGAAGCCGCCCTTATCTTCTTCTTCGGCATGATTGT
CAACATCCTGCTGTCTATGACCTCGCGTTTCAAGTACATCTACCTGTCCGGTCATGTGGCGTTCTACATGGCTACGATGG
TCGCCGTGATTCTCGAGGTTGCCGGTATGTCGACTTGGGGTGTGATTCTGTGGGGCTCCATCGCACAAGGTTTGATTGTC
ACCATCTCTCCCGCGCTTGTACAGCCGTTCATGAAGGATGCCGCCGGTACCAATGATGTCGCCCTTGGTCACACCGGTGG
TGCGGGCATTGCGCTCGGCGGTCTCGTGGCTCGTCTGACCCGTTCTAAGAAGCACCCGTCCAAGTCCACTGAGGACATCA
AGTTCCCTGCAGGCCTTGGTTTCCTTCGCGACACCACCGTCATCATCGCTCTGTCGATGGCCATTATTTATGTTGTCGTC
GCGCTGTTCGCGGGTAGCTCCTACATTGAATCTGAGCTGAGCGATGGGCAGAACTTCATCGTGTTCTCCATCCTGCAGGC
TGCCACATTCTCTGCTGGCGTGTTTGTCATTCTCGCTGGTGTGCGCGTGGTACTCGGTGAGATCGTACCTGCGTTCAAGG
GTATTTCCGAGAAGCTCGTGAAGAACTCGAAGCCGGCCCTTGACGTGCCGATGATCTTCACCTTCGCCCCCAATGCTGTG
CTTATCGGCTTCATCTCCAGCTTCGTTGGTGGTGTGGTCGGTATGGGAATCATGGCTCTGGCCGGTTCCACCATCATTAT
CCCGGGTATTGTGGCTCACTTCATGACCGGCGGCGCCACTGGTGTAATCGGTAACGGACAGGGCGGCGTACGTGGTGCGG
TGATTGGCTCCTTCGTCAATGGTTTGGCGATTACATTCCTGCCGCTATTCCTGCTGCCTGTGCTTGGCGACACCGGCATG
GCGAATGCCACATATTCTGATGCGGATTATGGTGTTGCTGGTATTCTGCTTGGCCAATTCGGCAAGGGTGGTCAGATTGG
TCTCATTATTGGTATTATCGCTTCGGTCGTGGTGTTCTATGCCGCATCGTTTGCGATGAGTGCGCGTGAGAAGAAGAAGG
CTGCCGTAGAAGCGAAATAA

Protein sequence :
MNGVLSVLLDIFRQPSIIVALISLVGLAVQRKKATDIMKGTIRTMVGFLVLAAGASVVSGALDPFGSMFQHAFNVQGVVP
NNEAIVGTVLVKYGSEAALIFFFGMIVNILLSMTSRFKYIYLSGHVAFYMATMVAVILEVAGMSTWGVILWGSIAQGLIV
TISPALVQPFMKDAAGTNDVALGHTGGAGIALGGLVARLTRSKKHPSKSTEDIKFPAGLGFLRDTTVIIALSMAIIYVVV
ALFAGSSYIESELSDGQNFIVFSILQAATFSAGVFVILAGVRVVLGEIVPAFKGISEKLVKNSKPALDVPMIFTFAPNAV
LIGFISSFVGGVVGMGIMALAGSTIIIPGIVAHFMTGGATGVIGNGQGGVRGAVIGSFVNGLAITFLPLFLLPVLGDTGM
ANATYSDADYGVAGILLGQFGKGGQIGLIIGIIASVVVFYAASFAMSAREKKKAAVEAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vpeC ADD91725.1 putative PTS system-specific IIC component VpeC Virulence PAI-I AL862 Protein 1e-69 51
ORF8 AAK27335.1 unknown Not tested PAI-I AL862 Protein 2e-69 51
unnamed CAC39291.1 hypothetical protein Not tested LPA Protein 1e-69 51