Gene Information

Name : metC_2 (HMPREF9228_1357)
Accession : YP_005583167.1
Strain : Bifidobacterium breve ACS-071-V-Sch8b
Genome accession: NC_017218
Putative virulence/resistance : Resistance
Product : cystathionine beta-lyase
Function : -
COG functional category : -
COG ID : -
EC number : 4.4.1.8
Position : 1539412 - 1540596 bp
Length : 1185 bp
Strand : -
Note : -

DNA sequence : 
ATGTCCGCTGAATACAACGCCAAGTTCGCCAACACCGCCGTCGCCACCCGCGCTATCCACGCCGGCCAGGAGCCTGACCC
CACCACCGGTGCTGTGGTTACGCCGATCTACGCCACTTCCACCTTCAAGCAGGACGGCGTGCTCGGCCTGCGCGGCGGCC
ACGACTACTCACGCTCCATCAACCCCACCCGCACCAGTTTTGACGAGCAGCTCGCCGCCGTGGAAGGCGCCAAGTACGCG
CTGAGCTTCTCCTCCGGCCTTGCCGCCATCGATGTGCTGCTGCGTTCCACCATCAAGCCTGGCGACAACATCCTGCTCGG
CAACGACGTGTACGGCGGCACCTACCGTCTGCTCTCCAAGGTGTTCGTGCCGTGGGGCGTGGGCCTCGATGTGGTGGACA
TCACCGACACCGCCGCCGTGGAAGCCGCGCTCGCCGCCAAGTCGTACAAGTATGTGTGGGTCGAAACCCCGTCCAACCCG
CTGCTCAACATCACCGACATCGCAGTCACCTCCGAAGTGGCCCATAAGTACGGCACCAAGGTGGCAGTCGACAATACCTT
CGCTTCGCCCGCCTTGCAGCACCCGCTCGATGATGGTGCCGATGTGGTGGTCTACTCCACCACCAAGTACATCGGCGGCC
ACTCCGATGTGGTCGGCGGTGCCGTGGTGCTCAACGATGAGGAAACCCGTGAGCAGGTGGCCTTCCTGCAGAACGCAGCC
GGTGCCGTGCCTTCCCCGTTCGATTCGTTCCTTGACATTCGCGGCCTGAAGACTCTGGATTTGCGCGTCAAGCGTCACAG
CGCCAACGCCCTGAAAGTGGCGGAATGGCTGGAATCCCAGCCTGCTGACGTGATTGAGCGCGTCTGGTATCCGGGCCTCG
AATCCCACCCGGGCCACGATATCGCGGTTCGTCAGATGCATGGCGGCTTCGGCGGCGTGCTCTCCGTGCAGCTTGCCGGC
GATGCCGAGGCTGCCAAGAAGTTCGTGGACTACACCGAGATCTTCACGCTGGCCGAATCGCTCGGCGGCGTGGAAAGCCT
GATCGAGGTGCCCGCCGCTATGACCCACGCCTCCGTGGCCGGCACCACCTTGCAGGTGCCCGCCAACCTGGTGCGTATCT
CGGTCGGCATCGAAAACGCCGATGACCTCATCGCCGACCTCAAGCAGGCTCTCGACCGTCTGTGA

Protein sequence : 
MSAEYNAKFANTAVATRAIHAGQEPDPTTGAVVTPIYATSTFKQDGVLGLRGGHDYSRSINPTRTSFDEQLAAVEGAKYA
LSFSSGLAAIDVLLRSTIKPGDNILLGNDVYGGTYRLLSKVFVPWGVGLDVVDITDTAAVEAALAAKSYKYVWVETPSNP
LLNITDIAVTSEVAHKYGTKVAVDNTFASPALQHPLDDGADVVVYSTTKYIGGHSDVVGGAVVLNDEETREQVAFLQNAA
GAVPSPFDSFLDIRGLKTLDLRVKRHSANALKVAEWLESQPADVIERVWYPGLESHPGHDIAVRQMHGGFGGVLSVQLAG
DAEAAKKFVDYTEIFTLAESLGGVESLIEVPAAMTHASVAGTTLQVPANLVRISVGIENADDLIADLKQALDRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-72 47
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-71 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
metC_2 YP_005583167.1 cystathionine beta-lyase BAC0207 Protein 8e-58 42