Gene Information

Name : BLC1_0638 (BLC1_0638)
Accession : YP_005579449.1
Strain : Bifidobacterium animalis BLC1
Genome accession: NC_017216
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease ATP-binding subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 781265 - 783817 bp
Length : 2553 bp
Strand : +
Note : -

DNA sequence :
ATGTTCGAACGGTTTACCGACCGTGCGCGCCGGGTCATCGTGCTCGCGCAGGAAGAGGCTCGTGCCCTCCAGCACAATTA
CATCGGCACCGAGCATCTGCTGCTTGGGCTGATTCGTGAGGGAGATGGCGTGGCCGCCAAGGCTCTCGAAGCCAAAGGCG
TGACGTTGGAAGACACCCGCAAGCAGGTCGAGGAGATGATCGGCAAGGGCACCGCGGCTCCGACAGGCCACATTCCCTTC
ACTCCGCATGCCAAGCAGGTGCTGGAGCTCTCGCTGCGTGAAGCGTTGCAGCTGGGGCATAGCTACATCGGAACCGAACA
TATTCTGTTGGGCCTCATTCGTGAGGGTGAGGGCGTGGGCACCCAGGTGCTCATCAAGATGGACGTCGATCTTTCCGACC
TGCGCAGCACCACGATCGACATGATTCGCGGCAACTCCGGCAACGGTGAGGGAGACAAGGGCGACATGGCCAACGCGGGT
TCCGTGCAGGACAAGCGCAGCCAGAGCGGTTCCGCCATACTGGATCAGTTCGGGCGCAACCTGACGGCCGAGGCGAAGGA
CGGCAAACTCGACCCGGTCATCGGCCGCAGCACTGAGATCGAACGCGTCATGGTGGTGCTTTCGCGCCGTACGAAGAACA
ATCCGGTGCTGATTGGTGAGCCGGGCGTCGGCAAGACGGCGGTGGTCGAGGGACTTGCGCAGAAGATCGTCGCCGGTGAT
GTGCCGGAGACGCTCAAGGACAAGCAGGTGTATTCGCTCGATCTGGGTTCCATGGTCGCGGGATCGCGGTATCGCGGTGA
TTTTGAGGAACGCTTGAAGAAGGTGCTCAAGGAGATCAAGACCCGCGGCGACATCGTGCTGTTCATCGATGAGATTCATA
CGATTGTGGGAGCTGGCTCCGCGGACGGGGCTCTCGGTGCCTCCGATATGCTCAAACCGATGCTGGCGCGCGGCGAGCTC
CAGACCATTGGCGCCACGACCACCGACGAGTACCGCAAGTACATCGAGAAGGACGCCGCCTTGGAACGCCGATTCCAGCC
GATCCAGGTGTCGGAACCGTCGATTGCCGAGACGATTGAGATCCTCAAGGGGTTGCGTGCACGCTACGAGAATCACCACC
ATGTGACGATCACCGATGGTGCACTGCAGTCTGCCGCAGAACTTTCGGCACGGTACATTCAGGACCGCAACCTTCCCGAT
AAGGCAATCGATTTGATCGATGAGGCGGGTGCGCGTCTGCGCATCAAGCGCCTTACCGCGCCTCCGGAGCTCAAGGAGCT
TGACAACCGCATTGCGCGCATCGCCAAGGAGAAGGACCAGACGATCAAGGACCAGCAGTTCGAGAAGGCCGCCGAGCTTC
GCGACAAGCAGGAGAAGCTTGAGGCTGAGCGCAAAGAGAAAGAGAAGTCCTGGCGTGAGGGCGAATCCGACGTCCGTATG
GTCGTCGATGAGGATGTGATCGCCGAGGTGATCTCGCAGAGCACGGGCATTCCGGTGTTCAAGCTCACCCAGGCGGAATC
CAAGAAGCTCATGTCGATGGAGAAGGAGCTGCATAAGCGCATCATCGGTCAGGATGAGGCCGTCTCTGCGCTGTCGCGCT
CCATCCGCCGTACACGTGTGGGACTCAAGGACCCGAAGCGTCCGGCGGGATCGTTCATCTTCGCCGGCCCCACCGGCGTG
GGCAAGACCGAACTTGCCAAGGCTCTCGCTCAGTTCCTGTTCGACGATGAGGATGCGCTCATTCGCGTCGACATGTCGGA
GTTCTCAGAAAAGTACGCGGCTTCGCGTCTGTTCGGAGCCCCTCCGGGATATGTCGGTTATGAGGAGGGTGGTGAGCTCA
CCGAGAAGGTGCGCCGCAAGCCGTTCTCCGTCGTGCTGTTCGATGAGATCGAAAAGGCCCATCCCGACATCTTCAACACA
TTGCTGCAGGTGTTGGATGACGGCCACTTGACCGATGGCCAGGGGCGCAAAGTGGACTTCAAGAACACCATCATCATTTT
GACGACCAATCTCGGCACGCGTGACATCGCGAAGACCGCCAATACAGGCTTCACGATGGGGGGCAACACCGAATCGAGCT
ATCAGCGCATGAAGGACCAGGTGTCGAGCGAGCTCAAGCAGCAGTTCCGCCCCGAGTTCCTCAACCGTTTGGATGACATC
ATCGTGTTCCGCCAGCTCACCGAACCGCAGGTGCGCCAGATCGTCGATCTCGATGTCACGAAGATCAACGATCGTCTGTT
CGAACGTCATATGGAGCTCGACCTGACCGATAAGGCCAAGGATTTGCTCGCGGAAAAGGGCTTCGACCCGTTGCTTGGTG
CCCGACCGCTACGTCGTGTGATTCAGCGTGATATCGAGGACACCATTTCCGAAAAGATTCTCATGGGCGATCTGCACGAC
AACGAACGTGTGATCGTCGATGCCGAAGGTGATGGCATTCTCGGGGAGTTCACGTTCCGCGGCGAGCCTTTCGAGCTCCC
GGCGGCAGGCGAAGGGGACGAGTCGAAGGATGTCGTGCCCGAACCTGCGGCTGCGGCGAGTGAGGCCGAATAA

Protein sequence :
MFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDTRKQVEEMIGKGTAAPTGHIPF
TPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLSDLRSTTIDMIRGNSGNGEGDKGDMANAG
SVQDKRSQSGSAILDQFGRNLTAEAKDGKLDPVIGRSTEIERVMVVLSRRTKNNPVLIGEPGVGKTAVVEGLAQKIVAGD
VPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGASDMLKPMLARGEL
QTIGATTTDEYRKYIEKDAALERRFQPIQVSEPSIAETIEILKGLRARYENHHHVTITDGALQSAAELSARYIQDRNLPD
KAIDLIDEAGARLRIKRLTAPPELKELDNRIARIAKEKDQTIKDQQFEKAAELRDKQEKLEAERKEKEKSWREGESDVRM
VVDEDVIAEVISQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRPAGSFIFAGPTGV
GKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFDEIEKAHPDIFNT
LLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKTANTGFTMGGNTESSYQRMKDQVSSELKQQFRPEFLNRLDDI
IVFRQLTEPQVRQIVDLDVTKINDRLFERHMELDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDTISEKILMGDLHD
NERVIVDAEGDGILGEFTFRGEPFELPAAGEGDESKDVVPEPAAAASEAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 0.0 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
BLC1_0638 YP_005579449.1 ATP-dependent Clp protease ATP-binding subunit VFG0079 Protein 0.0 57
BLC1_0638 YP_005579449.1 ATP-dependent Clp protease ATP-binding subunit VFG0080 Protein 5e-140 50