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Name : BIF_00332 (BIF_00332) Accession : YP_005576700.1 Strain : Bifidobacterium animalis BB-12 Genome accession: NC_017214 Putative virulence/resistance : Virulence Product : Negative regulator of genetic competence clpC/mecB Function : - COG functional category : - COG ID : - EC number : - Position : 1416588 - 1419176 bp Length : 2589 bp Strand : + Note : TlyB; Hemolysin DNA sequence : GTGGTTTGGAATTGTATTGATTATGGAAGGACAAGCATGTTCGAACGGTTTACCGACCGTGCGCGCCGGGTCATCGTGCT CGCGCAGGAAGAGGCTCGTGCCCTCCAGCACAATTACATCGGCACCGAGCATCTGCTGCTTGGGCTGATTCGTGAGGGAG ATGGCGTGGCCGCCAAGGCTCTCGAAGCCAAAGGCGTGACGTTGGAAGACACCCGCAAGCAGGTCGAGGAGATGATCGGC AAGGGCACCGCGGCTCCGACAGGCCACATTCCCTTCACTCCGCATGCCAAGCAGGTGCTGGAGCTCTCGCTGCGTGAAGC GTTGCAGCTGGGGCATAGCTACATCGGAACCGAACATATTCTGTTGGGCCTCATTCGTGAGGGTGAGGGCGTGGGCACCC AGGTGCTCATCAAGATGGACGTCGATCTTTCCGACCTGCGCAGCACCACGATCGACATGATTCGCGGCAACTCCGGCAAC GGTGAGGGAGACAAGGGCGACATGGCCAACGCGGGTTCCGTGCAGGACAAGCGCAGCCAGAGCGGTTCCGCCATACTGGA TCAGTTCGGGCGCAACCTGACGGCCGAGGCGAAGGACGGCAAACTCGACCCGGTCATCGGCCGCAGCACTGAGATCGAAC GCGTCATGGTGGTGCTTTCGCGCCGTACGAAGAACAATCCGGTGCTGATTGGTGAGCCGGGCGTCGGCAAGACGGCGGTG GTCGAGGGACTTGCGCAGAAGATCGTCGCCGGTGATGTGCCGGAGACGCTCAAGGACAAGCAGGTGTATTCGCTCGATCT GGGTTCCATGGTCGCGGGATCGCGGTATCGCGGTGATTTTGAGGAACGCTTGAAGAAGGTGCTCAAGGAGATCAAGACCC GCGGCGACATCGTGCTGTTCATCGATGAGATTCATACGATTGTGGGAGCTGGCTCCGCGGACGGGGCTCTCGGTGCCTCC GATATGCTCAAACCGATGCTGGCGCGCGGCGAGCTCCAGACCATTGGCGCCACGACCACCGACGAGTACCGCAAGTACAT CGAGAAGGACGCCGCCTTGGAACGCCGATTCCAGCCGATCCAGGTGTCGGAACCGTCGATTGCCGAGACGATTGAGATCC TCAAGGGGTTGCGTGCACGCTACGAGAATCACCACCATGTGACGATCACCGATGGTGCACTGCAGTCTGCCGCAGAACTT TCGGCACGGTACATTCAGGACCGCAACCTTCCCGATAAGGCAATCGATTTGATCGATGAGGCGGGTGCGCGTCTGCGCAT CAAGCGCCTTACCGCGCCTCCGGAGCTCAAGGAGCTTGACAACCGCATTGCGCGCATCGCCAAGGAGAAGGACCAGACGA TCAAGGACCAGCAGTTCGAGAAGGCCGCCGAGCTTCGCGACAAGCAGGAGAAGCTTGAGGCTGAGCGCAAAGAGAAAGAG AAGTCCTGGCGTGAGGGCGAATCCGACGTCCGTATGGTCGTCGATGAGGATGTGATCGCCGAGGTGATCTCGCAGAGCAC GGGCATTCCGGTGTTCAAGCTCACCCAGGCGGAATCCAAGAAGCTCATGTCGATGGAGAAGGAGCTGCATAAGCGCATCA TCGGTCAGGATGAGGCCGTCTCTGCGCTGTCGCGCTCCATCCGCCGTACACGTGTGGGACTCAAGGACCCGAAGCGTCCG GCGGGATCGTTCATCTTCGCCGGCCCCACCGGCGTGGGCAAGACCGAACTTGCCAAGGCTCTCGCTCAGTTCCTGTTCGA CGATGAGGATGCGCTCATTCGCGTCGACATGTCGGAGTTCTCAGAAAAGTACGCGGCTTCGCGTCTGTTCGGAGCCCCTC CGGGATATGTCGGTTATGAGGAGGGTGGTGAGCTCACCGAGAAGGTGCGCCGCAAGCCGTTCTCCGTCGTGCTGTTCGAT GAGATCGAAAAGGCCCATCCCGACATCTTCAACACATTGCTGCAGGTGTTGGATGACGGCCACTTGACCGATGGCCAGGG GCGCAAAGTGGACTTCAAGAACACCATCATCATTTTGACGACCAATCTCGGCACGCGTGACATCGCGAAGACCGCCAATA CAGGCTTCACGATGGGGGGCAACACCGAATCGAGCTATCAGCGCATGAAGGACCAGGTGTCGAGCGAGCTCAAGCAGCAG TTCCGCCCCGAGTTCCTCAACCGTTTGGATGACATCATCGTGTTCCGCCAGCTCACCGAACCGCAGGTGCGCCAGATCGT CGATCTCGATGTCACGAAGATCAACGATCGTCTGTTCGAACGTCATATGGAGCTCGACCTGACCGATAAGGCCAAGGATT TGCTCGCGGAAAAGGGCTTCGACCCGTTGCTTGGTGCCCGACCGCTACGTCGTGTGATTCAGCGTGATATCGAGGACACC ATTTCCGAAAAGATTCTCATGGGCGATCTGCACGACAACGAACGTGTGATCGTCGATGCCGAAGGTGATGGCATTCTCGG GGAGTTCACGTTCCGCGGCGAGCCTTTCGAGCTCCCGGCGGCAGGCGAAGGGGACGAGTCGAAGGATGTCGTGCCCGAAC CTGCGGCTGCGGCGAGTGAGGCCGAATAA Protein sequence : MVWNCIDYGRTSMFERFTDRARRVIVLAQEEARALQHNYIGTEHLLLGLIREGDGVAAKALEAKGVTLEDTRKQVEEMIG KGTAAPTGHIPFTPHAKQVLELSLREALQLGHSYIGTEHILLGLIREGEGVGTQVLIKMDVDLSDLRSTTIDMIRGNSGN GEGDKGDMANAGSVQDKRSQSGSAILDQFGRNLTAEAKDGKLDPVIGRSTEIERVMVVLSRRTKNNPVLIGEPGVGKTAV VEGLAQKIVAGDVPETLKDKQVYSLDLGSMVAGSRYRGDFEERLKKVLKEIKTRGDIVLFIDEIHTIVGAGSADGALGAS DMLKPMLARGELQTIGATTTDEYRKYIEKDAALERRFQPIQVSEPSIAETIEILKGLRARYENHHHVTITDGALQSAAEL SARYIQDRNLPDKAIDLIDEAGARLRIKRLTAPPELKELDNRIARIAKEKDQTIKDQQFEKAAELRDKQEKLEAERKEKE KSWREGESDVRMVVDEDVIAEVISQSTGIPVFKLTQAESKKLMSMEKELHKRIIGQDEAVSALSRSIRRTRVGLKDPKRP AGSFIFAGPTGVGKTELAKALAQFLFDDEDALIRVDMSEFSEKYAASRLFGAPPGYVGYEEGGELTEKVRRKPFSVVLFD EIEKAHPDIFNTLLQVLDDGHLTDGQGRKVDFKNTIIILTTNLGTRDIAKTANTGFTMGGNTESSYQRMKDQVSSELKQQ FRPEFLNRLDDIIVFRQLTEPQVRQIVDLDVTKINDRLFERHMELDLTDKAKDLLAEKGFDPLLGARPLRRVIQRDIEDT ISEKILMGDLHDNERVIVDAEGDGILGEFTFRGEPFELPAAGEGDESKDVVPEPAAAASEAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| BIF_00332 | YP_005576700.1 | Negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 57 |
| BIF_00332 | YP_005576700.1 | Negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 7e-140 | 50 |
