|
Name : CT43_CH0078 (CT43_CH0078) Accession : YP_005570062.1 Strain : Bacillus thuringiensis CT-43 Genome accession: NC_017208 Putative virulence/resistance : Virulence Product : negative regulator of genetic competence clpC/mecB Function : - COG functional category : - COG ID : - EC number : - Position : 98617 - 101052 bp Length : 2436 bp Strand : + Note : - DNA sequence : ATGATGTTTGGAAGATTTACAGAAAGAGCACAGAAAGTATTAGCTTTATCTCAAGAGGAAGCAATTCGTATTGGGCATAA TAATATTGGAACAGAACATATTTTACTTGGGCTTGTACGCGAAGGTGAAGGAATTGCAGCAAAAGCATTAATTGCTCTTG GATTAAGTCCAGAGAAAGTTCAAAAAGAAGTAGAAGCGTTAATTGGGCGTGGAACAGAAGCTTCTCAAACTGTACATTAT ACACCTCGTGCTAAAAAGGTTATTGAATTATCTATGGATGAAGCGCGTAAGCTAGGCCATTCTTACGTTGGAACAGAACA CATTTTACTCGGTTTAATCCGTGAAGGTGAAGGTGTAGCCGCACGTGTTTTAAATAATTTAGGTGTAAGTCTAAATAAAG CAAGACAACAAGTTTTACAACTTCTTGGAAGTAATGAAGCTAGTTCAGGTCATCAAGGTGGTTCAGCATCAAATGCAAAT ACACCGACACTTGACAGTTTAGCAAGGGACTTAACAGTTGTTGCGCGTGAAAATCGCTTAGACCCTGTTATTGGACGTGG TAAAGAAATTCAACGTGTAATTGAGGTATTAAGCCGTAGAACGAAAAACAACCCAGTATTAATTGGTGAGCCTGGTGTAG GTAAAACGGCAATTGCAGAAGGATTAGCACAGCAAATTGTAAATAATGAAGTTCCTGAAACTTTAAGAGATAAGCGTGTT ATGACACTAGATATGGGTACAGTGGTAGCTGGAACGAAATATCGCGGTGAATTTGAAGATCGTTTAAAGAAAGTGATGGA TGAAATTCGCCAAGCAGGCAATATTATTCTATTTATTGATGAGCTTCATACATTAATTGGTGCAGGTGGAGCAGAAGGTG CAATCGATGCATCGAATATTTTAAAACCATCTTTAGCACGAGGAGAGTTACAATGTATTGGGGCAACAACTTTAGATGAG TATCGTAAATATATTGAAAAAGACGCGGCTTTAGAAAGACGTTTTCAACCAATTCATGTTGATGAGCCAAGTTTAGAAGA ATCGATTCAAATCTTGAAAGGTTTACGTGATCGTTATGAGGCGCATCACCGTGTATCTATTACAGATGACGCTATTGATG CAGCTGTAAAACTTTCAGATCGTTATATTACAGATCGCTTTTTACCAGATAAAGCAATTGATTTAATTGATGAAGCTGCT TCAAAAGTTCGCTTACGTTCTTATACAACACCACCAAACTTAAAAGAGCTTGAAGTGAAGCTTGAGGAGATTCGAAAAGA AAAAGATGCAGCTGTACAAAGTCAAGAATTTGAAAAGGCTGCATCCTTACGTGATATGGAGCAACGCTTACGTGAGAAGT TAGAAGATACAAAACGTCAATGGAAAGAGCAACAAGGAAAAGAAAATTCAGAGGTTACGGTAGAAGATATTGCAAATGTC GTTTCTACATGGACGCGTATCCCAGTTTCTAAACTTGCACAAACAGAGACTGATAAATTATTAAATTTAGAATCCATTCT CCATGATCGTTTGATTGGTCAAGATGAAGCAGTAGTAGCTGTAGCAAAAGCTGTTCGTCGTGCAAGAGCAGGATTAAAAG ATCCGAAGCGCCCAATTGGTTCATTTATTTTCTTAGGGCCAACAGGTGTAGGTAAAACAGAACTTGCAAGAGCACTAGCA GAATCTATGTTCGGTGATGAAGATGCAATGATTCGCATCGATATGTCAGAATACATGGAGAAGCATTCTACTTCCCGTTT AGTTGGTTCTCCTCCAGGATATGTTGGATATGAAGAAGGTGGACAATTAACAGAGAAAGTTCGTCGCAAGCCATATTCAG TTGTCTTATTAGATGAGGTAGAGAAAGCTCATCCGGATGTGTTTAATATTTTACTACAAGTATTAGAAGATGGTCGTTTA ACAGATTCTAAAGGACGTACAGTTGATTTCCGTAATACGATTGTTATTATGACGTCTAACGTTGGTGCCGAGGCGTTAAA ACGTAACAAACATCTTGGATTTAATGTACAAGATGAAAGCCGTGATTATTCGGATATGAAAGGTAAAGTAATGGATGAGC TGAAAAAGGCATTTCGTCCAGAATTCTTAAACCGTATTGATGAAATTATCGTATTCCATATGCTTGAGAAAAAACATATT CAAGAGATTGTAACTCTTATGGTAAATCAGTTAGTTAATCGCTTAAAAGAACAAGAAATCGAATTGCACTTAACGGAAGG GGCAATTTCAGCTATTGCAGATAAAGGATTTGATCGTGAGTATGGCGCTCGTCCACTTCGCAGAGCAATTCAGAAACATG TAGAAGATAGACTATCAGAAGAACTTTTAAAAGGTGCTATTGAGAAAGGACAAAAAGTTATCTTTGATGTAGAAGGAGAA TCATTTGTCATTCATAGTGCGGAAAAGGTAAAATAA Protein sequence : MMFGRFTERAQKVLALSQEEAIRIGHNNIGTEHILLGLVREGEGIAAKALIALGLSPEKVQKEVEALIGRGTEASQTVHY TPRAKKVIELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNEASSGHQGGSASNAN TPTLDSLARDLTVVARENRLDPVIGRGKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIVNNEVPETLRDKRV MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE YRKYIEKDAALERRFQPIHVDEPSLEESIQILKGLRDRYEAHHRVSITDDAIDAAVKLSDRYITDRFLPDKAIDLIDEAA SKVRLRSYTTPPNLKELEVKLEEIRKEKDAAVQSQEFEKAASLRDMEQRLREKLEDTKRQWKEQQGKENSEVTVEDIANV VSTWTRIPVSKLAQTETDKLLNLESILHDRLIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA ESMFGDEDAMIRIDMSEYMEKHSTSRLVGSPPGYVGYEEGGQLTEKVRRKPYSVVLLDEVEKAHPDVFNILLQVLEDGRL TDSKGRTVDFRNTIVIMTSNVGAEALKRNKHLGFNVQDESRDYSDMKGKVMDELKKAFRPEFLNRIDEIIVFHMLEKKHI QEIVTLMVNQLVNRLKEQEIELHLTEGAISAIADKGFDREYGARPLRRAIQKHVEDRLSEELLKGAIEKGQKVIFDVEGE SFVIHSAEKVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 58 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| CT43_CH0078 | YP_005570062.1 | negative regulator of genetic competence clpC/mecB | VFG0079 | Protein | 0.0 | 78 |
| CT43_CH0078 | YP_005570062.1 | negative regulator of genetic competence clpC/mecB | VFG0080 | Protein | 5e-148 | 51 |
