Gene Information

Name : CT43_CH5421 (CT43_CH5421)
Accession : YP_005575366.1
Strain : Bacillus thuringiensis CT-43
Genome accession: NC_017208
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5372988 - 5373800 bp
Length : 813 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAACTTTAGCGGTTGATGCGGTATCTGTTGGCTATAATGAAGGTTTAATTATTGATGGATTAACAGTTGAAATTCC
GGAAGGGAAAATTACAACAATTATTGGGCCAAATGGTTGTGGGAAGTCCACATTATTAAAAACGGCGTCTCGTATTTTGA
AGGCAAAACAAGGTACTGTTTATCTTGACGGAAAAGCAATTGAGAAACAGCCAACGAAAGAAATTGCAAAGAAAATGGCG
ATTTTACCACAAACTGCAGAAGTACCAACGGGTCTTACTGTATTTGAGCTTGTGTCATACGGAAGATTCCCTCATCAAAA
AGGGTTTGGCACGTTGAAAGAAGAGGATTATCGCTACATTAACTGGGCACTTGAAGTGACAGGAATGAAAGAATTTGCGA
ATCGTCCAGCAGAAGCGCTATCTGGTGGTCAACGTCAACGTGTTTGGATTGCAATGGCTCTTGCACAAGGAACAGAATTA
CTTGTATTGGATGAACCAACAACGTACTTAGATATGGCTCATCAATTAGAAGTATTAAACTTATTGAAAAAGTTAAATGA
AGAAGAAGGTAGAACGATTGTTATGGTTATCCATGACTTAAACCACGCTTCTCGTTTCTCAGATCATATGATTGCATTAA
AAGCAGGTAAGTTAATGAAACAAGGAACACCAGATGAAGTTATGACAAGTGAAACACTTCGTAACGTATTTGAGATTGAA
GCTCAAATCGTTCCATGTCCAGTAAACTGTAAGCCAATTTGCTTAACATATGATTTAGCGATGATTAGTAATCAATTGCG
TAAAAAAGCTTAA

Protein sequence : 
MATLAVDAVSVGYNEGLIIDGLTVEIPEGKITTIIGPNGCGKSTLLKTASRILKAKQGTVYLDGKAIEKQPTKEIAKKMA
ILPQTAEVPTGLTVFELVSYGRFPHQKGFGTLKEEDYRYINWALEVTGMKEFANRPAEALSGGQRQRVWIAMALAQGTEL
LVLDEPTTYLDMAHQLEVLNLLKKLNEEEGRTIVMVIHDLNHASRFSDHMIALKAGKLMKQGTPDEVMTSETLRNVFEIE
AQIVPCPVNCKPICLTYDLAMISNQLRKKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-50 46
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-51 46
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-51 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-51 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-51 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-51 46
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-51 46
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 4e-50 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 44
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 44
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 44
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 4e-52 44
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-50 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CT43_CH5421 YP_005575366.1 ferrichrome ABC transporter ATP-binding protein BAC0164 Protein 1e-50 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CT43_CH5421 YP_005575366.1 ferrichrome ABC transporter ATP-binding protein VFG1042 Protein 1e-50 46
CT43_CH5421 YP_005575366.1 ferrichrome ABC transporter ATP-binding protein VFG0925 Protein 9e-50 46