Gene Information

Name : CT43_CH5287 (CT43_CH5287)
Accession : YP_005575232.1
Strain : Bacillus thuringiensis CT-43
Genome accession: NC_017208
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5231483 - 5232163 bp
Length : 681 bp
Strand : -
Note : -

DNA sequence : 
ATGATTACGTTAAATAATATTGCTAAAACGTATTATCAAGGAAAATTGGCGGTGCCGATTTTGCATGGTATTAGTTTAAC
GATTCAGAGCGGTGAGTTCGTTTCGATTATGGGACCGTCTGGTTCTGGTAAGTCAACGCTTATGAATATTATTGGTTGCT
TAGACCGTCCAACAGAAGGCGAATATAAGCTGAATGACGTGAATATCTTAACAGCAGACGAGTCAAAGCTTGCTTTAATT
CGTAATGAATATATTGGCTTTGTATTCCAGCATTTTAATTTACTGCCTCGTCTTTCCGCAGTGGAAAATGTTGAGCTTCC
GCTCGTATATGGTGGCGTGAAGAAAGCGGAGCGTCGTAAGCGTGCTTTGGAGGCGTTAGGCAAAGTTGGATTAGCGGACC
GCGTGCATCATTTACCAAATGAGTTATCAGGTGGACAGAAGCAGCGTGTAGCGATTGCAAGAGCGATTGCAAATAATCCA
ACGTTCATTATGGCCGATGAACCGACGGGTGCACTTGATACGAAGTCTGGTGAACAAGTTATGGATATTTTCACGAAGCT
TAATGCAGAAGGTACGACGATTGTTATGGTTACGCATGAAGAGGAAGTAGCAGCGTATTCTTCCCGCCGTATTGTACTGC
GAGACGGGAAAGTTACAGAAGATAGAAGGTGTGCGGTATGA

Protein sequence : 
MITLNNIAKTYYQGKLAVPILHGISLTIQSGEFVSIMGPSGSGKSTLMNIIGCLDRPTEGEYKLNDVNILTADESKLALI
RNEYIGFVFQHFNLLPRLSAVENVELPLVYGGVKKAERRKRALEALGKVGLADRVHHLPNELSGGQKQRVAIARAIANNP
TFIMADEPTGALDTKSGEQVMDIFTKLNAEGTTIVMVTHEEEVAAYSSRRIVLRDGKVTEDRRCAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-32 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-34 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CT43_CH5287 YP_005575232.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-62 60
CT43_CH5287 YP_005575232.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-46 49
CT43_CH5287 YP_005575232.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 2e-36 45
CT43_CH5287 YP_005575232.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 1e-37 44
CT43_CH5287 YP_005575232.1 ABC transporter ATP-binding protein NC_012469.1.7686946. Protein 1e-27 41