Gene Information

Name : alo (CT43_CH5149)
Accession : YP_005575096.1
Strain : Bacillus thuringiensis CT-43
Genome accession: NC_017208
Putative virulence/resistance : Virulence
Product : perfringolysin O precursor
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5087195 - 5088733 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
GTGATTTTTCTGAATATTAAGAAAAACACTAAAAGAAGAAAGTTCCTTGCATGTTTATTAGTTAGTCTATGCACTATTAA
TTATTCATCTATTTCCTTCGCAGAAACACAAGCAAGTAATGCAACTGATGTAACCAAAAATGCTAGTGGCATTGATACTG
GTATAGCAAATCTTAAATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAAAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTGGAACGCGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCAAT
TATTGATTCTGTGGTGAATCGCACGTATCCAGGAGCTGTACAACTTGCTAATAAAGCTTTTGCAGACAATCAACCGAGTT
TATTAGTGGCTAAGAGAAAGCCTTTGAATATTAGTATAGACTTACCGGGCATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTAGCTGGAGCAGTAGACGATTTAGTATCTACTTGGAATGAAAAGTATTCTACAACACATAC
GTTACCTGCAAGAATGCAGTATACGGAATCTATGGTTTATAGTAAATCACAAATTGCAAGTGCTCTTAATGTTAACGCTA
AATATCTTGATAACAGTCTAAATATTGATTTTAATGCGGTTGCAAATGGAGAGAAAAAAGTGATGGTAGCGGCGTATAAG
CAAATATTTTATACGGTAAGTGCTGAACTACCTAACAATCCATCCGACCTTTTTGATAATAGCGTTACTTTTGACGAGTT
AACTCGAAAAGGCGTAAATAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACGATTTATGTAAAAT
TAGAAACAACATCTAAGAGCAAAGATGTACAAGCTGCTTTTAAAGCCTTACTTAAGAATAACAGCGTTGAAACAAGTGGA
CAGTATAAAGATATTTTTGAAGAAAGTACCTTTACTGCTGTAGTATTAGGCGGAGATGCGAAAGAACATAACAAGGTTGT
TACTAAAGATTTCAATGAAATCCGAAATATTATTAAAGATAATGCTGAATTAAGTCTTAAAAATCCAGCATACCCAATTT
CATATACAAGTACTTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATTGAGACGACAACTACA
GAATATTCAAGTGCTAAAATGACACTTGATCATTACGGTGCTTACGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGATCAAAAGGGTAACGAAGTACTAACACATAAAACGTGGGATGGTAGTGGAAAAGACAAAACGGCTCATTACTCTA
CAGTTATCCCTCTTCCACCGAATTCAAAAAATATAAAAATTGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACAATTATTAATGAACAAAACGTTCCATTAACAAATGAAATAAAAGTTTCAATTGGAGGAACAACATTATACCCAAC
AGCTAGTATTAGTCATTAA

Protein sequence :
MIFLNIKKNTKRRKFLACLLVSLCTINYSSISFAETQASNATDVTKNASGIDTGIANLKYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVVNRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVNNSAPPVMVSNVAYGRTIYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSLKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQKGNEVLTHKTWDGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTASISH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 4e-151 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 3e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
alo YP_005575096.1 perfringolysin O precursor VFG2275 Protein 3e-175 71
alo YP_005575096.1 perfringolysin O precursor VFG0976 Protein 1e-151 63
alo YP_005575096.1 perfringolysin O precursor VFG0074 Protein 3e-101 43
alo YP_005575096.1 perfringolysin O precursor VFG1363 Protein 2e-101 42