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Name : CT43_P281092 (CT43_P281092) Accession : YP_005569539.1 Strain : Genome accession: NC_017203 Putative virulence/resistance : Unknown Product : Reverse transcriptase / RNA maturase / Endonuclease Function : - COG functional category : - COG ID : - EC number : - Position : 78933 - 80756 bp Length : 1824 bp Strand : - Note : - DNA sequence : ATGCAATGTCCAAAAATAGTACTAAGCAATCTGCGAACGAAGAGTCTTAATAAGGAATATCAATATACAAGACTTTATCG TAATTTATATAACCCAGATTTCTTTTTATTAGCATACGATAATCTAAGTAAAAATGATGGCGCATTAACGATAGGAGTAG ACCAAAGGTCTATTGATGGTTTTTCTATGAAGGAAGTGGAAGACTTGATAAGTGTTTTAAAAAGTAAAAGCTATCAACCA TATCCATCTAGAAGAACCTATATTGAAAAGAAAAATGGCAAGAAAAGGCCATTAGGAATTCCTAGCTTTTATGATAAATT AGTCCAAGAAGTTATACGTATGATACTAGAAGCAATATACGATTCAAGCTTTTCTAGTTCATCACATGGATACCGAAAAG GAAAGGGATGCCATAGTGCGTTATTAGAGATAAAGCGCACATTTACAGGTAGTAAATGGTTTATCGAAGGAGATATTAAA GGATTTTTCGACAATATTGAACATCATACTCTAGTTACAATTCTTAAAAGAAGAATAAAGGATGAGGCGTTTATAGAGTT GATCTGGAAATTCTTACGAGCTGGATATTTAGAAGAATGGAAATTTCATAATACCTATAGTGGAGCGCCTCAAGGTGGAA TCATTAGTCCAATAATTTCTTATATTTATCTAAATGAATTAGATACTTATATGAAAAAGTATCAGGATAGATTTGAATCA GGGAAAAAGCGACAAATAAATAAAGAGTATAGTAATTTACAGTATAAAGTGCGGAAGATTCAAGAGAAAATCGATACTGC CTATCTAAATGGAGAAGTAACACGAATTACGGAACTAAAAGAACAACAAAAAGTTTTGAAAGGGAAGTTGTTACAAACAC CTTATAATAATCCAATGGATGAAAATTATAGAAGGCTCAAATATGTAAGATATGCGGATGACTTTCTTATTGGAGTAATA GGTTCTAAAGAGGATGCAATTCTTATTAAAAATGAGATAGCTTCATTTTTGAAAGAAGAGATAAAACTAGAATTATCTAT GGAAAAGACTCTGATAACAAATGCCTTCAAGAAACACGCTAAATTTCTAGGATTTGAAATTAAAGTGTTTAAAAGTGAAG CAACACGCATTAACAGTCTTGGGAGAGCTTCTAGGGTTCTTAACGGTAAAATTCAATTGAAAATGCCACATGAGGCATGG ATAAAGAAACTTCAAAAGTATCAGGCCATTAAAATGTGTGCCGATGGCACTTGGAAACCTCAGCCAAGAGGATATTTCCA ACACAATGAAGATTTAGAGATTATCACGCAATATAATAGCGAAATTCGAGGGTTATACAATTACTATCGACTAGCTGAAA ATGTGAGCAATCACATGCACCGCTTTGCATATTTCATGTATTATTCAATGTTGAAAACTTTTGCGTCAAAATACAGAACA CGTACGAAACAAATTCGAGAGAAATACGAAAAGTACGGACAATTTACTGTACAGTATGAGACAAAGAAAGGAATGAATAA AGTTCATTTCATTGAAAGAAAGTTTCCAATGACAAGAAATTTATCACTAGAAGGAACAGACATTTTACCAAATACTCGGC ATGTAATGAGTACGACTAAATTGTCAGATAGAATCAAGGCGGAAACATGTGAACTATGCGGAACTAGCAATGTTGTGATA CATATGCATCACATTAAGAGATTAAAGAATCTACGAGCAAAGTCAAATAAATCATATCTTGAACAACAAATGATAGCGAG AAATCGAAAGACTATCGCACTCTGTAAAGAGTGTCATATGAAAAGACACAAGGGCGAGATATAA Protein sequence : MQCPKIVLSNLRTKSLNKEYQYTRLYRNLYNPDFFLLAYDNLSKNDGALTIGVDQRSIDGFSMKEVEDLISVLKSKSYQP YPSRRTYIEKKNGKKRPLGIPSFYDKLVQEVIRMILEAIYDSSFSSSSHGYRKGKGCHSALLEIKRTFTGSKWFIEGDIK GFFDNIEHHTLVTILKRRIKDEAFIELIWKFLRAGYLEEWKFHNTYSGAPQGGIISPIISYIYLNELDTYMKKYQDRFES GKKRQINKEYSNLQYKVRKIQEKIDTAYLNGEVTRITELKEQQKVLKGKLLQTPYNNPMDENYRRLKYVRYADDFLIGVI GSKEDAILIKNEIASFLKEEIKLELSMEKTLITNAFKKHAKFLGFEIKVFKSEATRINSLGRASRVLNGKIQLKMPHEAW IKKLQKYQAIKMCADGTWKPQPRGYFQHNEDLEIITQYNSEIRGLYNYYRLAENVSNHMHRFAYFMYYSMLKTFASKYRT RTKQIREKYEKYGQFTVQYETKKGMNKVHFIERKFPMTRNLSLEGTDILPNTRHVMSTTKLSDRIKAETCELCGTSNVVI HMHHIKRLKNLRAKSNKSYLEQQMIARNRKTIALCKECHMKRHKGEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| EFAU085_00689 | YP_008394213.1 | HNH endonuclease domain protein | Not tested | Not named | Protein | 8e-115 | 44 |
