Gene Information

Name : YBT020_28454 (YBT020_28454)
Accession : YP_005569266.1
Strain :
Genome accession: NC_017201
Putative virulence/resistance : Unknown
Product : putative site-specific recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 139130 - 139702 bp
Length : 573 bp
Strand : +
Note : COG1961 Site-specific recombinases, DNA invertase Pin homologs

DNA sequence :
GTGAAGTATGGATATGCAAGAGTGAGCACCTTGAACCAGGATTTGGAATCTCAAATTCAAATGTTACAAAAAGAGGGTTG
CGAAGAAATTTACTCCGAAAAGTTTACAGGTACAAAATTTGATCGGCCGAAATTTCAAGAACTACTTTCTGTGGTAGAAA
CTGGAGATACACTTGTTGTAACGAAATTAGATCGTTTTGCACGTTCAGCTGAAAATGCTATTCAAACGATTAGAATGTTA
TTCGAAAAAGGAGTTAAGGTCCATATATTAAATATGGGGGTAGTGGAAGATACACCTACAGGAAGATTGATGTTTAATAT
TATGAGTTCATTTGCGGAATTTGAACGGGACATGATTGTGGAGAGGACACAAGAAGGGAAAGCAATTGCGAAAATGAATC
CTGATTTCAAGGAAGGACGACCGAAGAAATACAATAAGAAGCAAATAGAACATGCACTTGATTTATTGAAAACGAAGTCT
TATAGGCAAGTAGAAGAAATGACAGGAATTAGTGTGAGTACCTTGCAACGAGAAAAAAGGAAACGATCAGCAGAGAAAGA
AAAAGAGAAATAA

Protein sequence :
MKYGYARVSTLNQDLESQIQMLQKEGCEEIYSEKFTGTKFDRPKFQELLSVVETGDTLVVTKLDRFARSAENAIQTIRML
FEKGVKVHILNMGVVEDTPTGRLMFNIMSSFAEFERDMIVERTQEGKAIAKMNPDFKEGRPKKYNKKQIEHALDLLKTKS
YRQVEEMTGISVSTLQREKRKRSAEKEKEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
binR YP_254224.1 resolvase/integrase BinR Not tested ¥ðSh1 Protein 1e-24 41
binL YP_254524.1 DNA-invertase Not tested ¥ðSh2 Protein 1e-24 41
SH1761 YP_253676.1 DNA-invertase Not tested ¥ÕSh1 Protein 1e-24 41