Gene Information

Name : YBT020_03655 (YBT020_03655)
Accession : YP_005564396.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Virulence
Product : sphingomyelinase C
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 779314 - 780315 bp
Length : 1002 bp
Strand : +
Note : -

DNA sequence : 
GTGAAAGGTAAATTGTTAAAAGGTGTACTTAGCTTTGGGATTGGTTTAGGAGTTTTATACGGAGGATCTTCAGCTCAAGC
AGATACGTCTACAGATCAAAACAACACTTTGAAAGTGATGACGCATAATGTGTACATGCTATCAACTAACTTATATCCGA
ATTGGGGACAAAGTGAGCGTGCTGATTTAATTGGGGCGGCAGATTATATGAAGAATCAAGACGTTGTTATATTAAATGAA
GTGTTTGATAATAGTGCTTCAGATCGCCTTTTAGGAAATTTGAAGAAAGAATACCCAAATCAAACAGCTGTATTAGGTCG
TAGTAACGGAAATGAATGGGATAAAACGTTAGGTAGCTATTCATCTGCAACTCCTGAAGATGGGGGCGTTGCAATCGTGA
GCAAATGGCCGATCGTTGAAAAGGTTCAATATGTATTTGCAAATGGATGCGGACCAGATAATTTATCGAATAAAGGATTT
GTATACACGAAAATTAAGAAAAATGATCGTTTCGTTCATGTAATTGGGACGCATTTGCAGGCTGAAGATAGTATGTGCGG
AAAAACTTCACCTGCATCTGTACGTACAAACCAGTTAAAAGAAATTCAAGATTTTATTAAAAATAAAAATATACCAAATG
ACGAGTACGTCTTATTTGGTGGTGATATGAATGTGAATAAAATAAATGCTGAGAACAATAGTGACTCAGAGTACGCATCA
ATGTTCAAAACATTACATGCTTCTATTCCATCTTATACAGGACATACAGCAACTTGGGATGCGACGACAAACAGTATTGC
AAAATATAATTTCCCTGATAGCCCTGCCGAGTATTTAGATTATATTATTGCAAGTAAGGATCATGCGAATCCATCATTTA
TAGAGAATAAAGTATTACAACCGAAATCTCCACAGTGGACTGTTACATCATGGCTCAAAAAATATACATATAATGATTAC
TCTGATCATTATCCAGTAGAGGCGACTATTTCTATGAAGTAG

Protein sequence : 
MKGKLLKGVLSFGIGLGVLYGGSSAQADTSTDQNNTLKVMTHNVYMLSTNLYPNWGQSERADLIGAADYMKNQDVVILNE
VFDNSASDRLLGNLKKEYPNQTAVLGRSNGNEWDKTLGSYSSATPEDGGVAIVSKWPIVEKVQYVFANGCGPDNLSNKGF
VYTKIKKNDRFVHVIGTHLQAEDSMCGKTSPASVRTNQLKEIQDFIKNKNIPNDEYVLFGGDMNVNKINAENNSDSEYAS
MFKTLHASIPSYTGHTATWDATTNSIAKYNFPDSPAEYLDYIIASKDHANPSFIENKVLQPKSPQWTVTSWLKKYTYNDY
SDHYPVEATISMK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hlb NP_646757.1 truncated beta-hemplysin Not tested ¥ÕSa3 Protein 1e-70 59
hlb NP_375112.1 hypothetical protein Not tested ¥ÕSa3 Protein 1e-70 58
truncated-hlb NP_372527.1 hypothetical protein Not tested ¥ÕSa3 Protein 8e-71 58
unnamed CAA70683.2 sphingomyelinase-c Virulence LIPI-2 Protein 2e-77 55

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_03655 YP_005564396.1 sphingomyelinase C VFG1798 Protein 4e-78 58
YBT020_03655 YP_005564396.1 sphingomyelinase C VFG0674 Protein 1e-77 55