Gene Information

Name : YBT020_03340 (YBT020_03340)
Accession : YP_005564333.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Virulence
Product : iron compound ABC transporter substrate-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 711795 - 712760 bp
Length : 966 bp
Strand : -
Note : COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component

DNA sequence :
ATGAAATTCATGCGAAAGAAATCGTTTACAGTATTTGTATTTTTATTAGCATTTTCACTACTTTTAAGTGCTTGTGGAAA
ATCAAATACGAAAGAAGAAACAAAAGAAGATACGAAAAAAGAAATGATTCCTGTGGAACATGCAATGGGTAAAACAGAAG
TTCCTGCTAATCCAAAACGTGTAGTCATTTTAACAAATGAAGGTACTGAAGCTTTACTTGAATTAGGTATTAAACCAGTT
GGGGCTGTAAAATCTTGGACTGGTGATCCGTGGTATCCACATATTAAAGATAAAATGAAAGATGTAAAAGTTGTTGGTGA
TGAAGGACAAGTGAACGTAGAAACTATCGCTTCTTTAAAACCAGACTTAATTATCGGTAACAAAATGCGTCACGAAAAAG
TGTACGAGCAACTAAAAGCAATTGCACCTACTGTGTTTTCTGAAACATTACGCGGTGAATGGAAAGATAACTTCAAGTTT
TATGCGAAAGCATTAAATAAAGAAAAAGAAAGCCAAAAGGTTTTAGCTGATTACGATAAACGTATGAAAGATTTAAAAGC
CAAACTAGGTGATAAAGTAAATCAAGAAATTTCTATGGTTCGCTTCATGCCTGGTGATGTTCGTATTTATCATGGTGATA
CATTCTCTGGTGTTATTTTAAAAGAACTTGGATTTAAACGTCCTGGCGATCAAAATAAAGATGACTTCGCAGAGCGTAAC
GTATCTAAAGAACGTATTTCTGCAATGGATGGCGATGTATTGTTCTACTTCACATTCGATAAAGGAAATGAGAAAAAAGG
CTCTGAATTAGAAAAAGAATATATCAATGATCCACTATTTAAAAATTTAAATGCAGTGAAAAATAATAAAGCATACAAAG
TTGACGATGTGATTTGGAATACTGCTGGCGGTGTAATGGCTGCTAACCTACTATTAGATGATATCGAAAAACGCTTTGTT
AAATAG

Protein sequence :
MKFMRKKSFTVFVFLLAFSLLLSACGKSNTKEETKEDTKKEMIPVEHAMGKTEVPANPKRVVILTNEGTEALLELGIKPV
GAVKSWTGDPWYPHIKDKMKDVKVVGDEGQVNVETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKF
YAKALNKEKESQKVLADYDKRMKDLKAKLGDKVNQEISMVRFMPGDVRIYHGDTFSGVILKELGFKRPGDQNKDDFAERN
VSKERISAMDGDVLFYFTFDKGNEKKGSELEKEYINDPLFKNLNAVKNNKAYKVDDVIWNTAGGVMAANLLLDDIEKRFV
K

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagD YP_003782433.1 iron-siderophore binding protein Virulence PiCp 1 Protein 9e-42 42
fagD YP_005680310.1 Iron siderophore binding protein Not tested PiCp 1 Protein 1e-41 42
fagD YP_005682400.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-41 42
fagD YP_005684491.1 Iron siderophore binding protein Virulence PiCp 1 Protein 1e-41 42