Gene Information

Name : YBT020_03105 (YBT020_03105)
Accession : YP_005564288.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Virulence
Product : DNA-binding response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 657239 - 657910 bp
Length : 672 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence : 
ATGCGCTTACTCGTAGTAGAAGATAATGCTTCTTTATTAGAATCTATTGTCGAAATATTACACGACGAATTTGAAGTAGA
TACAGCATTGAATGGAGAAGAGGGATTATTTCTAGCATTACAAAATATATATGACGCAATTTTGCTTGATGTGATGATGC
CAGAGATGGATGGATTTGAAGTGATTCAAAAAATACGTGATGAAAAGATTGAAACACCAGTCCTATTTTTAACAGCGAGA
GATTCTTTAGAAGATCGGGTGAAGGGATTGGATTTTGGTGGAGATGACTATATCGTTAAGCCGTTTCAGGCTCCAGAATT
AAAAGCAAGAATTCGTGCTTTGTTACGAAGAAGTGGTAGTTTAACAACAAAGCAGACTATTCGCTATAAAGGGATTGAAC
TGTTTGGAAAAGATAAAGATGTTCAAGTAGATGGACAAAGTATGAAGTTAACATTAAAACAATATGAGCTTCTAGAGTAC
CTCGTTCAAAATAGCGGAAAGATTTTAATGAGGGAACAAATTTTTGATCGTGTTTGGGGATTTGATTCAGATACGACAGT
GGCAATTGTAGAAGTGTATGTACATCATTTACGTAAAAAATTAGAGCCATTCGGTTATCAGAAAGATATTCAAACCGTTC
GAGGTATTGGATATATATTAAAAGAACAATGA

Protein sequence : 
MRLLVVEDNASLLESIVEILHDEFEVDTALNGEEGLFLALQNIYDAILLDVMMPEMDGFEVIQKIRDEKIETPVLFLTAR
DSLEDRVKGLDFGGDDYIVKPFQAPELKARIRALLRRSGSLTTKQTIRYKGIELFGKDKDVQVDGQSMKLTLKQYELLEY
LVQNSGKILMREQIFDRVWGFDSDTTVAIVEVYVHHLRKKLEPFGYQKDIQTVRGIGYILKEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-35 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_03105 YP_005564288.1 DNA-binding response regulator BAC0125 Protein 6e-36 44
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_002952.2859858.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_007622.3794948.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator AE015929.1.gene1106. Protein 2e-37 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_003923.1003417.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_013450.8614146.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_002951.3238224.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_007793.3914065.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_002758.1121390.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator NC_010079.5776364.p0 Protein 4e-42 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator BAC0638 Protein 2e-33 42
YBT020_03105 YP_005564288.1 DNA-binding response regulator BAC0308 Protein 9e-33 41
YBT020_03105 YP_005564288.1 DNA-binding response regulator HE999704.1.gene1528. Protein 2e-35 41
YBT020_03105 YP_005564288.1 DNA-binding response regulator BAC0197 Protein 2e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_03105 YP_005564288.1 DNA-binding response regulator VFG1386 Protein 1e-41 43
YBT020_03105 YP_005564288.1 DNA-binding response regulator VFG0596 Protein 2e-35 42
YBT020_03105 YP_005564288.1 DNA-binding response regulator VFG1390 Protein 9e-39 42
YBT020_03105 YP_005564288.1 DNA-binding response regulator VFG1389 Protein 6e-37 42