Gene Information

Name : YBT020_26315 (YBT020_26315)
Accession : YP_005568903.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Virulence
Product : capsular exopolysaccharide family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 5128274 - 5128951 bp
Length : 678 bp
Strand : -
Note : COG0489 ATPases involved in chromosome partitioning

DNA sequence : 
ATGTTCGGGAGAAAAAAAAGAAAACCATTACGACAATTAATTACACATAAAGAGCCTAAGTCACGTATTGCGGAACAATA
CCGTAACATCCGTACAAACATTGAGTTTACATCTATAGATAGCAGTATCCGTTCTATTGTTGTCACTTCGGCAAATCCGG
GTGAAGGAAAAACAACGACCGTTTCCAATCTAGCAGTTGTTTTCGGACAACAAGGAAAGAAAGTCTTATTAATCGGAGCA
GACTTACGTAAGCCGACGATTCAAAACTTATTTGCCATCCACAGTTCAAATGGATTAACGAACCTATTATCAGGACAAGC
GAAACTGATGCAATGCATTCAAAAAACAGATATAGAGAATGTATACTTAATGGCTTCAGGTCCAATCCCGCCAAACCCGG
CTGAACTATTAGGTAGCCGGGCAATGGACGAGCTATTACTAGAAGCATATAACATGTTTGATATTATTTTAATCGACACA
CCACCAGTCCTTGCGGTTACCGATGCACAACTCTTAGCGAACAAATGCGATGGAATTGTACTGGTCGTACGTAGTGAAAA
AACAGAAAAAGATAAAATCGTAAAAGCAAAGCAAATATTAGACAAAGCGTCTGGTAAATTACTTGGTGTTGTTTTAAATG
ATAAGAGAGAAGAGCAGGGACAATATGGATATTATTAG

Protein sequence : 
MFGRKKRKPLRQLITHKEPKSRIAEQYRNIRTNIEFTSIDSSIRSIVVTSANPGEGKTTTVSNLAVVFGQQGKKVLLIGA
DLRKPTIQNLFAIHSSNGLTNLLSGQAKLMQCIQKTDIENVYLMASGPIPPNPAELLGSRAMDELLLEAYNMFDIILIDT
PPVLAVTDAQLLANKCDGIVLVVRSEKTEKDKIVKAKQILDKASGKLLGVVLNDKREEQGQYGYY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-40 41
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_26315 YP_005568903.1 capsular exopolysaccharide family protein VFG1298 Protein 9e-44 42
YBT020_26315 YP_005568903.1 capsular exopolysaccharide family protein VFG1368 Protein 1e-28 41