Gene Information

Name : YBT020_24480 (YBT020_24480)
Accession : YP_005568541.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Unknown
Product : protein YdcL
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4760376 - 4761437 bp
Length : 1062 bp
Strand : +
Note : COG0582 Integrase

DNA sequence :
ATGGTGATCTATAAGGATGACAAACGAGGTACATATTTCTTCGTAGTAAGAGTCCGTCAGTTTGATGGGACAACCAAGCA
AGTAAAACGTCGTGGGTTTAAAACAAAAAAAGAAGCACGTGAAGCAGAAGCTAAAATGTTAGTTGAAAAAGAATCCAACT
CCAATCTAACATTTGAGCACGTTGCAGATAGTTATTTTAATTGGTATACGCAGAGGAGGAAACAATCTTCAATAAATACC
ATAAAAAATGCCATCTACAATCATTTAATGAAAGAATTTGGAAAAATGAAAATTGACTGTATCACACCTAGACATGTAAT
GGACTATCAAAACAAAATGATCAATGAATACTCTGCGGAATATTTAAAAAAATTCCACACTACACTCTCAGCAATATTTA
ATTTTGGGATAAAATTTCATGGTTTAACAACCAATCCAGCAAGAATTGCTGGGAATTTTCAAAAAGAATCAAAGAAAAGA
ATTAACTTTTGGGAATTCGAAGAATTTAAACAGTTTATCAGTGTGGTAGATGAGCCCATGTATAAAGCATTCTTTTCAAC
TCTTTATTATAGTGGAGCAAGAAAAGGCGAACTACTAGCTTTAACTTGGGAAGATATAAATTTCGAAGAAAAGACCATTA
ACATTCACAAAACTAAATACAATCGTCAAGTTACAGAACCAAAAACTAAAGCTTCTAATCGAATTATTATGTTACCTAAC
TTTGTAATGAATTTATTAAAAAGTATAAAAAAAGATGCTGCACTAACAGCACCAGTTAAAAATGATTATGTTGTTTTTGG
TGAATTCTATGATAGTCTCGCCACAACTTCATTACATAAAAAATTCAACAACTATCTAAAGATTGCTATGGTTAAAGAGA
TTGTAATGCATGAGTTTAGACATTCTCATGCTTCTTATCTAATAAATAAAGGTGTTAGCCCGCTGGTTGTAGCCCAGCGA
TTAGGGCATTCTGATGTAGCAACAACTTTAAATACTTATAGCCATTTGTATCCTTCGAAGCAAGCAGAAGTAGTTGCGTT
TATGGAAAAAGATTTGCTATAA

Protein sequence :
MVIYKDDKRGTYFFVVRVRQFDGTTKQVKRRGFKTKKEAREAEAKMLVEKESNSNLTFEHVADSYFNWYTQRRKQSSINT
IKNAIYNHLMKEFGKMKIDCITPRHVMDYQNKMINEYSAEYLKKFHTTLSAIFNFGIKFHGLTTNPARIAGNFQKESKKR
INFWEFEEFKQFISVVDEPMYKAFFSTLYYSGARKGELLALTWEDINFEEKTINIHKTKYNRQVTEPKTKASNRIIMLPN
FVMNLLKSIKKDAALTAPVKNDYVVFGEFYDSLATTSLHKKFNNYLKIAMVKEIVMHEFRHSHASYLINKGVSPLVVAQR
LGHSDVATTLNTYSHLYPSKQAEVVAFMEKDLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAV0783 NP_371307.1 integrase Not tested vSa3 Protein 2e-60 43
int AET14330.1 integrase Not tested SaPI68111 Protein 7e-62 43
int NP_645562.1 hypothetical protein Not tested vSa3 Protein 7e-62 42