Gene Information

Name : YBT020_23760 (YBT020_23760)
Accession : YP_005568398.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Resistance
Product : two-component response regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4614163 - 4614852 bp
Length : 690 bp
Strand : -
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGGCAAAAAACATTTTAATTGTAGAAGATGAAGATATTTTGCGTGAAATATTAAAAGATTATTTTTTAAGTGAGCAATA
TGTAGTGTTTGAAGCAAGGGATGGGAAAGAAGCTTTAGTTGTATTTGAAGAAGAAGAGGTTGATTTAGTTATTTTAGATA
TTATGTTGCCAGAACTTGATGGGTGGTCCGTTTGCCGAAGAATCCGTAAAACATCTGAGGTTCCTATCATTATGCTAACG
GCACGTGTTGATGAAGATGATACGTTACTTGGCTTTGAACTTGGGGCGGATGACTATGTGACGAAGCCATATAGCCCACC
AATTTTATTAGCAAGAGCAAAACGGTTGTTAGAGAGTAGAAAAGTGACAAAGCAGCTTTTAGAGAATGAAGATGATACAT
TATCAATTCATGGTATTCATGTCCATTTTCCATCGCGTACTGTTACGGTAGATAAAACAGACATTAATTTAACTCATACA
GAATTTGAAATATTAGCGTACTTGATGAAAAATCAGGGGATTGTTTTAACAAGAGAGCAACTCATTTCGAGAATTTGGGG
ATATGAATTTGCTGGTGACGATCGAACGGTTAATAGTCATATTCGTAATTTAAGAAATAAATTAGGAGAGAAAGCAAAGT
ACATTACAACTGTAGTACGAACAGGTTATAAATTTGAGGGGAATGTATGA

Protein sequence :
MAKNILIVEDEDILREILKDYFLSEQYVVFEARDGKEALVVFEEEEVDLVILDIMLPELDGWSVCRRIRKTSEVPIIMLT
ARVDEDDTLLGFELGADDYVTKPYSPPILLARAKRLLESRKVTKQLLENEDDTLSIHGIHVHFPSRTVTVDKTDINLTHT
EFEILAYLMKNQGIVLTREQLISRIWGYEFAGDDRTVNSHIRNLRNKLGEKAKYITTVVRTGYKFEGNV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanRB NP_815956.1 DNA-binding response regulator VanRB Not tested Not named Protein 2e-27 41
vanRB YP_008394254.1 DNA-binding response regulator VanRB Not tested Not named Protein 1e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_23760 YP_005568398.1 two-component response regulator NC_002952.2859905.p0 Protein 8e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_002951.3237708.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_007622.3794472.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_002758.1121668.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_009641.5332272.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_013450.8614421.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_007793.3914279.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_003923.1003749.p0 Protein 6e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_002745.1124361.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_009782.5559369.p0 Protein 7e-33 45
YBT020_23760 YP_005568398.1 two-component response regulator NC_012469.1.7686381. Protein 5e-33 43
YBT020_23760 YP_005568398.1 two-component response regulator NC_012469.1.7685629. Protein 4e-30 43
YBT020_23760 YP_005568398.1 two-component response regulator U35369.1.gene1.p01 Protein 9e-28 41
YBT020_23760 YP_005568398.1 two-component response regulator AF310956.2.orf0.gene Protein 5e-28 41
YBT020_23760 YP_005568398.1 two-component response regulator AE016830.1.gene2255. Protein 9e-28 41
YBT020_23760 YP_005568398.1 two-component response regulator HE999704.1.gene1528. Protein 1e-22 41