Gene Information

Name : YBT020_22555 (YBT020_22555)
Accession : YP_005568157.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Unknown
Product : DNA polymerase I
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4396402 - 4399035 bp
Length : 2634 bp
Strand : -
Note : COG0258 5'-3' exonuclease (including N-terminal domain of PolI)

DNA sequence :
TTGGAAAAAAAGGTCGTATTAGTAGATGGTAATAATATCGCGTATCGTGCTTTCTTTGCACTACCGCTTTTAAATAACGA
CAAAGGTATACATACGAACGCAATTTACGGTTTTACAATGATGTTAATGAGAATATTAGAGGAAGAAAAACCGACGCATA
TGTTAGTAGCATTTGATGCTGGGAAAACGACATTCCGTCATAAAACATATAGTGAGTATAAAGGAGGACGTCAAAAGACT
CCGCCTGAGTTATCAGAGCAATTCCCATTTATTCGTGAGATGCTTGATGCATTCAATGTACCGCGTTATGAATTAGAAAA
TTATGAAGCGGATGACATTATGGGAACGCTAGCGAAAGAAGCGAGTGAACAAGGAGCTAGTGTAAAAGTTATTTCAGGAG
ATAAAGACTTACTTCAACTTGTTTCTGATAACACGCTTGTATGTATTCCTCGAAAAGGGATTACGGAAGTAGACGAATAT
ACGAAAGAAGCTTTATTTGAAAAATACAGCTTATCACCAAAGCAAATTATCGATATGAAAGGTTTAATGGGAGACCAATC
AGATAATATTCCAGGTGTACCAGGAGTTGGTGAAAAAACTGCGATTAAATTGTTAACACAGTTTGGAACGGTTGAAGAAG
TGTATGAAAATATAGATCAAGTAAGCGGGAAGAAATTAAAAGAAAAGCTGGAAGCAAATAAAGACCAAGCTCTTATGAGT
AAAGATCTTGCAACGATTATTACAGACGCCCCGATTACAGTGCATGTGGATGATATGGAGTATAAAGGGTATGAAGCAAG
TGATGTCATTCCAATGTTCGAGAATTTAGGATTCACATCTCTTTTAAATAAATTAGGTGTTACGCCAGAAGAAACGGCTC
CAGCTGAATTAGATGATATTACATTTGATATTGTAGAAGAAGTTACAGAAGAAATGCTTCAGCAAGATAGTGCGCTTATC
GTTGAAGTACAAGAAGATAATTATCATAAAGCAGATATTCAAGGTTTCGGTATTCAAAATGAAAACGGATGTTACTTTAT
TCAGACAGACATTGCACTTAAATCAGATGCTTTTAAAGAGTGGCTTGCAGATGGAGAAATGAGAAAGTATACATTTGATG
CGAAGCGTGCGATCGTTGCGCTGAAATGGAACGGTATAGATATGCAAGGAATTGACTTTGATCTATTAATCGCTGCTTAC
TTACTTGATCCGGCTGATACAGATAAAGATTTCCGTACTGTAGCGAAAATGAAAGAAACGCATGCTGTGAAATCTGATGA
AGAAGTTTACGGAAAAGGTGCGAAGCGTGCTGTTCCAGAGTTAGAGATAGTAGCGGAGCATGTAGCTCGTAAAGTGCATG
TATTATATGATGTGAAGCAAACATTCGTTGAAGAGTTAGAAAAGAATGAGCAATATGAACTGTTTACAGAGTTAGAATTA
CCACTTGCACGTGTATTAGCTGATATGGAAGTGAAAGGTGTAAAAGTTGATACAGAACGTCTTCGTAATATGGGAGAAGA
ACTTGCAGGTAGATTAAAGGAAATGGAACAGGAAATTTATAAGCTGGCGGGAACAGAATTTAATATTAATTCACCGAAGC
AGCTTGGTGTGATTCTGTTTGAGAACTTAAACTTACCAGTTATTAAAAAGACGAAAACAGGTTATTCTACGTCAGCTGAT
GTACTAGACAAGCTGATGGATCACCATGAAATTATTCCAAATATTTTACATTACCGTCAATTAGGGAAACTCAATTCAAC
TTATATTGAAGGTTTATTAAAAGTTGTACATGAAGATTCATCTAAAATTCATACTCGTTTCAATCAAGTATTAACGCAAA
CAGGTCGATTAAGTTCAACGGATCCAAACTTGCAAAATATCCCGATTCGATTAGAAGAAGGAAGAAAGATTCGTCAGGCA
TTCGTTCCATCAGAAGAAGGATGGATTATGTACGCGGCAGATTATTCACAAATTGAACTTCGTGTATTAGCTCATATTGC
CAATGATAAAGGGCTAGTTGAAGCATTCCAACATGATATGGATATTCATACGAAAACAGCTATGGATGTATTTGGCGTTG
AAAAAGATGAAGTAACTTCAAATATGAGAAGACAAGCGAAAGCTGTTAACTTCGGAATTGTGTATGGTATTAGTGATTAT
GGTCTTTCACAAAACTTAGGAATTACAAGAAAAGCAGCAGCGGAATTTATTGAAAAGTATTTAGAAAGTTTCCCTGGTGT
ACAAGAATACATGGATGACATCGTAAAAGATGCGAAACAAAAAGGATATGTAGCTACATTATTAAATCGCCGCCGTTACA
TTCCGGAAATTACGAGTCGTAATTTTAACTTGCGTAGCTTTGCTGAGCGTACAGCTATGAATACACCAATTCAAGGTACT
GCAGCAGATATTATTAAAAAAGCGATGATTATTATGGCAGATCGTTTAGAAGAAGAAGGATTACAAGCGCGTCTTCTATT
GCAAGTACACGATGAATTAATATTTGAAGCACCAAAAGAAGAAATTGAAAAATTAGAGAAGCTTGTACCAGAAGTAATGG
AGCATGCAATTGAACTCGCAGTTCCGCTGAAAGTTGATTATTCTTACGGTCCAACTTGGTACGACGCAAAATAA

Protein sequence :
MEKKVVLVDGNNIAYRAFFALPLLNNDKGIHTNAIYGFTMMLMRILEEEKPTHMLVAFDAGKTTFRHKTYSEYKGGRQKT
PPELSEQFPFIREMLDAFNVPRYELENYEADDIMGTLAKEASEQGASVKVISGDKDLLQLVSDNTLVCIPRKGITEVDEY
TKEALFEKYSLSPKQIIDMKGLMGDQSDNIPGVPGVGEKTAIKLLTQFGTVEEVYENIDQVSGKKLKEKLEANKDQALMS
KDLATIITDAPITVHVDDMEYKGYEASDVIPMFENLGFTSLLNKLGVTPEETAPAELDDITFDIVEEVTEEMLQQDSALI
VEVQEDNYHKADIQGFGIQNENGCYFIQTDIALKSDAFKEWLADGEMRKYTFDAKRAIVALKWNGIDMQGIDFDLLIAAY
LLDPADTDKDFRTVAKMKETHAVKSDEEVYGKGAKRAVPELEIVAEHVARKVHVLYDVKQTFVEELEKNEQYELFTELEL
PLARVLADMEVKGVKVDTERLRNMGEELAGRLKEMEQEIYKLAGTEFNINSPKQLGVILFENLNLPVIKKTKTGYSTSAD
VLDKLMDHHEIIPNILHYRQLGKLNSTYIEGLLKVVHEDSSKIHTRFNQVLTQTGRLSSTDPNLQNIPIRLEEGRKIRQA
FVPSEEGWIMYAADYSQIELRVLAHIANDKGLVEAFQHDMDIHTKTAMDVFGVEKDEVTSNMRRQAKAVNFGIVYGISDY
GLSQNLGITRKAAAEFIEKYLESFPGVQEYMDDIVKDAKQKGYVATLLNRRRYIPEITSRNFNLRSFAERTAMNTPIQGT
AADIIKKAMIIMADRLEEEGLQARLLLQVHDELIFEAPKEEIEKLEKLVPEVMEHAIELAVPLKVDYSYGPTWYDAK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
polA YP_281523.1 DNA polymerase I Not tested Not named Protein 0.0 51