Gene Information

Name : YBT020_18725 (YBT020_18725)
Accession : YP_005567391.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Unknown
Product : group II intron
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3672633 - 3674459 bp
Length : 1827 bp
Strand : -
Note : COG3344 Retron-type reverse transcriptase

DNA sequence :
TTGGCTGACTTGATGATTCAAAAGTTAAGAAACAATGAATATTTTGGCTTACAATCAACTTTTGACAATCTTTATGAAGA
AAGCAAAAAGGGTCGATATTTCAAAAATATTTATGAGCTGATTATTTCTGAAGAAAACATTCGATTAGCCTTTCGTAATT
TAAAAAGCAACATAGGTAGTAAAACGAAAGGGACAAATGGTCACACAATAAAACATCTTAATAAAATAGATGCCGACAAG
CTAATTAGATTAACGCAGAAGAGATTGGAAAACTATATGCCGCATGCAGTAAGGCGTTTGTTTATATCAAAGCCAAATGG
AAAAATGCGACCTTTAGGGATTCCAACAATTGAAGACCGATTAATCCAGCAAATGTTCCAACAAGTTCTAGAGCCGATTG
TTGAAGGGAAGTTCCATCCACAAAGCTATGGTTTTCGACCAAAACGCGGCACTCATGATGCTTTAGCTAGATGCTATCAT
ATGGTTAATCACAGTCATCAACATTTTGTAGTGGACATAGATATTAAAGGTTTCTTCGATAACGTTAATCATAAAAAGTT
AATGAGGCAACTATGGACAATTGGAATACGGGATAAAAAAGTTTTATCCATTATCAAAAAGATGCTGAAGGCGGAAGTTA
CAGGTGAAGGCATTCCTGTTAAAGGGACTCCTCAAGGTGGTATTTTATCTCCATTACTAGCCAACGTTGTATTAAATGAA
CTTGACTGGTGGGTGTCAAACCAATGGGAAACAAAGCCGACAAGAGTACCTTATAAATTAAAACGCAATAAAACGGATGC
GCTAAAAAAGACAAGGTTAAAGCCAATGTATCTAGTAAGGTATGCAGATGATTTTAAAATCTTCACAAATTCCTACGATA
ACGCTAGAAAGATTAAAATAGCGGTTGAAAAATGGCTCAAAGAAAGATTGGGTCTTGAGATAAGTGAAGAAAAAAGTAAA
ATCACAAACTTACGGAAAAACGGTACAGATTTTTTAGGGATTCGATTTAGAGCAGTTCAGAAGGGGAATGCTAAAACTGG
TTATATTGTAAATTCTAAAATGGACCCGAAAGCGAAAGATAAAGTATTGGGTGTCATTAGGCATCAACTAGTGAAACTAA
GAAAAAGTCCCACTCCAGAAAAAGTGATGAATTTTAATTCGAATATACTTGGGTTGCATAATTACTACAAAATTGCGACC
AGAATCTCTCAAGATTTTAACGAGCTAAGACATAAAATTCATCCGAATATAAAATCATTGATGTTCAGAAACATCTTTGT
TTATACAATAGAAACTAATCATATCATTGATAAGTTTTATGGAGATTATAATTGTCCAAGGTTTAAAAGTAATGGATTAC
TGGTCTATCCTATTGAAGCAATTCGACATGATATACGAGGTCAAAGAGACCCTAATTTTTCTGTTTATAATAAAAAGGAT
AGGGCATCAATTCATAAAGAGATAAAACATGTGTCTGTGCGAGAAATCGAAATGTTTCGTAAAGGAATATATAAAGCAAA
AAGTGTTTTGTATGAAAATAATCGCTTAAGTAAATATGTCGCGCAAAAAGGATGTTGTGGCATAACGGGAGAACGATTAA
CTCCTCATAATGCTATATGTCATCACATTAAGCCAACAGGGCAAGGTGGTAGTGATGAATATCACAACTTGATTATTATT
AATAAGAAATACCATACATTAATTCATAATAAAGACCCTCTTGCAAATGAAGATTATAAAAAAATGTTAGTCAAGCTTGA
AAAGAAAGCATTAAATAAATTAAATAAGTTGAGAACGGAAGTAGGAAATCCAAAACTCAGCTTATAA

Protein sequence :
MADLMIQKLRNNEYFGLQSTFDNLYEESKKGRYFKNIYELIISEENIRLAFRNLKSNIGSKTKGTNGHTIKHLNKIDADK
LIRLTQKRLENYMPHAVRRLFISKPNGKMRPLGIPTIEDRLIQQMFQQVLEPIVEGKFHPQSYGFRPKRGTHDALARCYH
MVNHSHQHFVVDIDIKGFFDNVNHKKLMRQLWTIGIRDKKVLSIIKKMLKAEVTGEGIPVKGTPQGGILSPLLANVVLNE
LDWWVSNQWETKPTRVPYKLKRNKTDALKKTRLKPMYLVRYADDFKIFTNSYDNARKIKIAVEKWLKERLGLEISEEKSK
ITNLRKNGTDFLGIRFRAVQKGNAKTGYIVNSKMDPKAKDKVLGVIRHQLVKLRKSPTPEKVMNFNSNILGLHNYYKIAT
RISQDFNELRHKIHPNIKSLMFRNIFVYTIETNHIIDKFYGDYNCPRFKSNGLLVYPIEAIRHDIRGQRDPNFSVYNKKD
RASIHKEIKHVSVREIEMFRKGIYKAKSVLYENNRLSKYVAQKGCCGITGERLTPHNAICHHIKPTGQGGSDEYHNLIII
NKKYHTLIHNKDPLANEDYKKMLVKLEKKALNKLNKLRTEVGNPKLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF2326 NP_815981.1 group II intron reverse transcriptase maturase Not tested Not named Protein 2e-110 43