Gene Information

Name : YBT020_16250 (YBT020_16250)
Accession : YP_005566898.1
Strain : Bacillus thuringiensis YBT-020
Genome accession: NC_017200
Putative virulence/resistance : Virulence
Product : perfringolysin O, thiol-activated cytolysin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3178913 - 3180451 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
GTGATTTTTCTGAATAATAAGAAAAATACCAAGAGAAGAAAGTTCCTTACATGTGTATTAGTTAGTCTATGCACTCTTAA
TTATTCATCTATTTCTTTCGCAGAAACACAAGCCGGTCATGCAACTGATATAACTAAAAATGCTAGTAGCATTGATACTG
GTATAGCAAACCTTACATATAATAATCAAGAGGTTTTAGCTGTAAATGGTGATAAAGTAGAGAGTTTTGTTCCGAAAGAA
AGTATCAATTCAAATGGTAAATTTGTAGTAGTGGAACGTGAGAAAAAATCACTTACAACGTCACCAGTCGATATTTCGAT
TATTGATTCTGTAGCGAATCGTACGTATCCAGGAGCTGTACAACTTGCCAATAAAGCTTTTGCAGACAATCAACCGAGTT
TATTAGTGGCTAAGAGAAAGCCTTTGAATATTAGTATAGACTTACCTGGTATGAGAAAAGAAAATACAATCACTGTCCAA
AATCCGACATATGGTAATGTGGCTGGAGCAGTAGATGATTTAGTATCTACTTGGAATGAAAAGTATTCCACAACACATAC
GTTACCTGCAAGAATGCAGTATACAGAATCTATGGTTTATAGTAAATCACAAATCGCAAGTGCTCTCAATGTTAATGCTA
AATATCTTGATAACAGTCTAAATATTGACTTTAATGCAGTTGCAAATGGAGAAAAGAAAGTGATGGTGGCGGCATATAAA
CAAATATTTTATACTGTAAGTGCTGAACTACCTAATAATCCATCTGATCTCTTTGATAATAGTGTTACTTTTGATGAGCT
AACTCGTAAAGGAGTAAGTAATTCGGCTCCACCTGTTATGGTTTCAAATGTAGCTTATGGTAGAACGGTTTATGTAAAAT
TAGAAACAACATCTAAGAGTAAAGATGTACAAGCTGCTTTTAAAGCTTTACTTAAGAATAACAGCGTTGAAACGAGTGGG
CAGTACAAAGATATTTTTGAAGAAAGTACCTTTACTGCTGTCGTATTAGGTGGAGATGCGAAAGAGCATAACAAGGTTGT
TACAAAAGATTTCAATGAAATCCGAAATATCATTAAAGATAATGCTGAATTAAGTTTTAAAAATCCAGCATACCCAATTT
CATATACAAGCACGTTCTTAAAAGATAATGCAACTGCTGCTGTTCATAACAATACAGATTATATCGAGACGACAACTACA
GAATATTCAAGTGCTAAAATGACACTCGATCATTACGGTGCTTACGTTGCTCAATTTGATGTATCTTGGGATGAATTCAC
ATTTGATCAAAATGGGAAAGAAGTACTAACACATAAAACATGGGAAGGTAGTGGCAAAGACAAAACAGCCCATTACTCTA
CAGTTATTCCTCTTCCACCAAATTCAAAAAATATAAAAATCGTAGCAAGAGAATGTACAGGTCTTGCATGGGAATGGTGG
AGAACCATTATTAATGAACAAAATGTTCCATTAACAAATGAAATAAAGGTTTCAATTGGAGGAACAACATTATACCCAAC
GGCTAATGTTAGTCATTAG

Protein sequence :
MIFLNNKKNTKRRKFLTCVLVSLCTLNYSSISFAETQAGHATDITKNASSIDTGIANLTYNNQEVLAVNGDKVESFVPKE
SINSNGKFVVVEREKKSLTTSPVDISIIDSVANRTYPGAVQLANKAFADNQPSLLVAKRKPLNISIDLPGMRKENTITVQ
NPTYGNVAGAVDDLVSTWNEKYSTTHTLPARMQYTESMVYSKSQIASALNVNAKYLDNSLNIDFNAVANGEKKVMVAAYK
QIFYTVSAELPNNPSDLFDNSVTFDELTRKGVSNSAPPVMVSNVAYGRTVYVKLETTSKSKDVQAAFKALLKNNSVETSG
QYKDIFEESTFTAVVLGGDAKEHNKVVTKDFNEIRNIIKDNAELSFKNPAYPISYTSTFLKDNATAAVHNNTDYIETTTT
EYSSAKMTLDHYGAYVAQFDVSWDEFTFDQNGKEVLTHKTWEGSGKDKTAHYSTVIPLPPNSKNIKIVARECTGLAWEWW
RTIINEQNVPLTNEIKVSIGGTTLYPTANVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
slo YP_281505.1 streptolysin O Virulence Not named Protein 1e-150 63
hly AAA69525.1 listeriolysin O Virulence LIPI-1 Protein 2e-101 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
YBT020_16250 YP_005566898.1 perfringolysin O, thiol-activated cytolysin VFG2275 Protein 2e-175 70
YBT020_16250 YP_005566898.1 perfringolysin O, thiol-activated cytolysin VFG0976 Protein 3e-151 63
YBT020_16250 YP_005566898.1 perfringolysin O, thiol-activated cytolysin VFG1363 Protein 2e-102 43
YBT020_16250 YP_005566898.1 perfringolysin O, thiol-activated cytolysin VFG0074 Protein 2e-101 43